*2007/12/19 14:04:03.68 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2007/10/29 14:17:27.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 111 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 3DDF0866 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.25 110.55 2 Temperature:Primary 'deg C (ITS90)' 8.88252 9.648167 3 Transmissivity %/metre 37.62 39.06 4 Salinity:T0:C0 PSS-78 31.48683 32.11022 5 Fluorescence:URU:Seapoint mg/m^3 0.2301111 0.4243333 6 Number_of_bin_records n/a 2 10 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.delfl ------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro $END *ADMINISTRATION MISSION : 2007-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : DE 06 EVENT NUMBER : 363 LATITUDE : 54 14.71000 N ! (deg min) LONGITUDE : 132 55.58000 W ! (deg min) WATER DEPTH : 110 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature ' ' 4700 conductivity ' ' 3184 Pressure ' ' 0573 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR $END $REMARKS SOFTWARE VERSION 1.57 Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.delfl ------------------------------------------------------------------- SOFTWARE VERSION 1.57 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/12/14 14:49:05 3958 3958 CLEAN 5.0.2 2007/12/14 14:52:43 ? ? HDREDIT2 2.5.1 2007/12/14 15:07:03 ? ? ADTIMCH 4.3 2007/12/15 16:16:36 3849 3849 SHIFTDAT 3.4 2007/12/15 16:53:27 3849 3849 DELETE 6.3 2007/12/15 16:56:54 3849 1030 CTDEDIT 4.61 2007/12/18 14:27:42 1030 1016 MERGE 3.3 2007/12/19 13:00:37 1016 1016 FILTERS 4.3 2007/12/19 13:12:29 1016 1016 BINAVE 4.1.1 2007/12/19 13:13:09 1016 111 REMOVECH 8.0 2007/12/19 14:03:44 111 111 HDREDIT2 2.5.1 2007/12/19 14:04:03 ? ? $END $REMARKS -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:07:03 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 100.60 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT 2007/12/18 14:27:42 14 records were deleted in this editing session. 66 changes in channel Salinity:T0:C0 -The following MERGE parameters were used: 2007/12/19 12:58:29 2007/12/19 12:58:30 2007/12/19 12:58: Merge Channel: Pressure [decibar] Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Scan_Number [n/a], Pressure [decibar], Temperature:Primary [deg C (ITS90)], Conductivity:Primary [S/m], Transmissivity [%/metre], Descent_Rate [m/s], Salinity:T0:C0 [PSS-78], Flag [n/a] Secondary Channels to Include: Fluorescence:URU:Seapoint [mg/m^3] Primary file : Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.edt Secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.delfl Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.delfl ------------------------------------------------------------------- -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:07:03 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 100.60 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure [decibar] Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2007/12/19 14:03:44 4 channels removed. -HEADER EDITS: 2007/12/19 14:04:03 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65000.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 29 2007 20:32:11 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:De 06 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/29/07 21:35:14.777 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.952 vmain = 11.8 iop = 186 vlith = 5.3 ncasts = 7 samples = 19109 free = 743132 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 0 10/29 07:17:27 smpls 0 to 3957 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3958 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3958 # span 1 = -0.550, 110.560 # span 2 = -12.8153, 9.6520 # span 3 = 0.008422, 3.445020 # span 4 = -1.1679, 87.4778 # span 5 = 1.8315e-02, 6.8498e-01 # span 6 = -1.226, 1.202 # span 7 = 0.0591, 32.1108 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 29 2007 07:17:27 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:49, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0363.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:11:29, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-036 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:56, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-036 3.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:41:16, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0363. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:43:07, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0363.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* CTDEDIT was used to remoe surface records to 1db and records corrupted by shed wakes around 50 and 75db; salinity was cleaned. Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0363.delfl ------------------------------------------------------------------- SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65000.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 29 2007 20:32:11 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:De 06 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/29/07 21:35:14.777 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.952 vmain = 11.8 iop = 186 vlith = 5.3 ncasts = 7 samples = 19109 free = 743132 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 0 10/29 07:17:27 smpls 0 to 3957 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3958 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3958 # span 1 = -0.550, 110.560 # span 2 = -12.8153, 9.6520 # span 3 = 0.008422, 3.445020 # span 4 = -1.1679, 87.4778 # span 5 = 1.8315e-02, 6.8498e-01 # span 6 = -1.226, 1.202 # span 7 = 0.0591, 32.1108 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 29 2007 07:17:27 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:49, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0363.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:11:29, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-036 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:56, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-036 3.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:41:16, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0363. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:43:07, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0363.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* Fluorescence and Transmissivity are unedited and nominal, except that some records were removed in editing temperature and salinity. !--1--- ---2---- --3-- ---4---- ---5--- -6-- !Pressu Temperat Trans Salinity Fluores Numb !re ure: missi :T0:C0 cence: er_o ! Primary vity URU: ~bin ! Seapoin _rec ! t ords !------ -------- ----- -------- ------- ---- *END OF HEADER 1.2 9.6069 37.8 31.4870 0.414 4 2.0 9.6073 37.8 31.4874 0.402 10 3.0 9.6098 37.8 31.4868 0.401 10 4.0 9.6192 37.6 31.4918 0.415 10 4.9 9.6206 37.8 31.4932 0.405 10 6.0 9.6280 37.9 31.5015 0.424 9 6.9 9.6393 37.9 31.5191 0.385 10 7.9 9.6482 37.9 31.5652 0.380 9 8.9 9.6274 38.0 31.6208 0.376 10 9.9 9.6162 38.1 31.6305 0.345 10 10.9 9.6061 38.2 31.6340 0.350 7 12.0 9.5821 37.8 31.6446 0.356 8 13.0 9.5701 38.3 31.6505 0.347 8 13.9 9.5605 38.3 31.6568 0.331 9 15.0 9.5354 38.4 31.6706 0.338 9 15.9 9.5028 38.2 31.6844 0.365 9 17.0 9.4604 38.4 31.7037 0.351 10 18.0 9.3958 38.3 31.7396 0.315 10 19.0 9.3566 38.4 31.7867 0.309 10 20.0 9.3556 38.5 31.7883 0.302 10 21.0 9.3569 38.5 31.7884 0.301 10 22.0 9.3574 38.5 31.7868 0.299 9 23.0 9.3391 38.5 31.8226 0.282 10 24.0 9.3397 38.6 31.8228 0.288 10 24.9 9.3231 38.6 31.8413 0.288 8 26.0 9.3171 38.6 31.8440 0.289 8 27.0 9.3157 38.7 31.8441 0.263 10 28.0 9.3133 38.6 31.8452 0.285 10 29.0 9.3070 38.7 31.8481 0.285 10 30.0 9.3057 38.7 31.8486 0.264 9 31.0 9.2980 38.7 31.8510 0.259 10 32.0 9.2947 38.7 31.8520 0.270 10 33.0 9.2719 38.7 31.8609 0.273 10 34.0 9.2636 38.7 31.8634 0.277 10 35.0 9.2649 38.7 31.8629 0.267 9 35.9 9.2577 38.6 31.8677 0.278 6 37.0 9.2561 38.6 31.8690 0.273 8 37.9 9.2529 38.7 31.8714 0.275 9 39.0 9.2477 38.7 31.8759 0.279 10 40.0 9.2439 38.8 31.8786 0.263 9 41.0 9.2436 38.8 31.8787 0.269 10 42.0 9.2399 38.8 31.8811 0.265 10 43.0 9.2366 38.8 31.8835 0.258 10 44.0 9.2298 38.9 31.8894 0.259 10 44.9 9.2269 38.8 31.8915 0.257 9 46.0 9.2157 38.8 31.9010 0.255 9 47.0 9.2056 38.8 31.9067 0.263 10 48.0 9.1999 38.8 31.9098 0.262 10 49.0 9.2029 38.8 31.9082 0.267 8 49.8 9.1829 38.8 31.9172 0.273 7 50.9 9.1791 38.8 31.9192 0.257 8 52.0 9.1795 38.8 31.9180 0.264 7 52.9 9.1801 38.8 31.9171 0.295 7 54.0 9.1772 38.8 31.9186 0.271 10 55.0 9.1803 38.9 31.9179 0.266 10 56.0 9.1750 38.8 31.9193 0.272 10 56.9 9.1660 38.8 31.9232 0.273 9 58.0 9.1565 38.8 31.9278 0.280 10 58.9 9.1511 38.9 31.9302 0.288 9 60.0 9.1436 38.8 31.9336 0.286 8 60.9 9.1381 38.8 31.9364 0.271 8 61.9 9.1180 38.8 31.9480 0.280 8 63.0 9.0939 38.7 31.9610 0.281 9 64.0 9.0658 38.8 31.9726 0.279 10 64.9 9.0666 38.8 31.9723 0.279 10 65.9 9.0414 38.9 31.9827 0.284 10 67.0 9.0360 38.9 31.9847 0.280 9 68.0 9.0391 38.9 31.9834 0.273 9 68.9 9.0496 38.8 31.9786 0.287 8 69.9 9.0556 38.9 31.9772 0.268 10 70.9 9.0203 38.8 31.9941 0.287 10 71.9 9.0083 38.9 32.0005 0.268 10 73.0 8.9942 38.8 32.0095 0.270 9 73.9 8.9803 38.9 32.0184 0.272 9 75.2 8.9733 38.9 32.0234 0.277 5 75.9 8.9712 38.8 32.0243 0.262 8 77.0 8.9726 38.8 32.0235 0.282 9 78.0 8.9740 38.7 32.0231 0.276 7 79.0 8.9687 38.8 32.0271 0.265 8 80.0 8.9649 38.9 32.0303 0.289 9 80.9 8.9616 38.9 32.0339 0.315 8 82.0 8.9644 38.8 32.0328 0.295 8 82.9 8.9641 38.8 32.0334 0.266 9 83.9 8.9604 38.9 32.0359 0.272 10 84.9 8.9612 38.9 32.0359 0.272 10 85.9 8.9620 38.9 32.0359 0.278 10 86.9 8.9608 38.9 32.0356 0.265 10 87.9 8.9605 38.8 32.0368 0.266 10 88.9 8.9608 38.9 32.0382 0.267 8 89.9 8.9566 38.9 32.0418 0.262 10 90.9 8.9041 38.9 32.0760 0.243 10 91.9 8.8904 38.9 32.0842 0.235 10 92.9 8.8903 38.8 32.0840 0.230 10 94.0 8.8888 38.8 32.0855 0.230 9 94.9 8.8887 38.9 32.0883 0.234 10 95.9 8.8825 38.9 32.0898 0.241 10 96.9 8.8871 38.9 32.0925 0.255 9 97.9 8.8900 38.8 32.0933 0.262 10 98.9 8.8927 39.0 32.0949 0.259 10 99.9 8.8929 38.9 32.1023 0.263 10 100.9 8.8929 38.9 32.1039 0.259 10 101.9 8.8937 38.9 32.1041 0.265 10 102.9 8.8947 39.0 32.1027 0.260 10 103.9 8.8947 39.1 32.1022 0.263 10 104.9 8.8931 38.9 32.1060 0.264 10 105.9 8.8936 39.0 32.1054 0.265 10 106.9 8.8937 39.0 32.1054 0.255 10 107.9 8.8927 39.0 32.1070 0.258 10 108.9 8.8908 38.8 32.1083 0.264 10 109.9 8.8882 39.0 32.1102 0.262 10 110.6 8.8912 38.9 32.1083 0.273 2