*2007/12/19 14:03:52.98 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2007/10/12 00:58:38.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 47 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6DBEFD32 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 0.3 45.7 2 Temperature:Primary 'deg C (ITS90)' 9.94122 11.95437 3 Transmissivity %/metre 13.53333 52.4 4 Salinity:T0:C0 PSS-78 31.097 32.2494 5 Fluorescence:URU:Seapoint mg/m^3 0.2586667 1.36 6 Number_of_bin_records n/a 3 10 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.delfl ------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro $END *ADMINISTRATION MISSION : 2007-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : JF 07 EVENT NUMBER : 26 LATITUDE : 48 35.88000 N ! (deg min) LONGITUDE : 124 54.24000 W ! (deg min) WATER DEPTH : 58 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature ' ' 4700 conductivity ' ' 3184 Pressure ' ' 0573 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR $END $REMARKS SOFTWARE VERSION 1.57 Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.delfl ------------------------------------------------------------------- SOFTWARE VERSION 1.57 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/12/14 14:47:18 2259 2259 CLEAN 5.0.2 2007/12/14 14:51:40 ? ? HDREDIT2 2.5.1 2007/12/14 15:05:58 ? ? ADTIMCH 4.3 2007/12/15 16:15:13 2167 2167 SHIFTDAT 3.4 2007/12/15 16:52:24 2167 2167 DELETE 6.3 2007/12/15 16:55:47 2167 366 CTDEDIT 4.61 2007/12/17 09:39:37 366 365 MERGE 3.3 2007/12/19 12:58:40 365 365 FILTERS 4.3 2007/12/19 13:12:04 365 365 BINAVE 4.1.1 2007/12/19 13:12:43 365 47 REMOVECH 8.0 2007/12/19 14:03:30 47 47 HDREDIT2 2.5.1 2007/12/19 14:03:52 ? ? $END $REMARKS -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:58 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 35.90 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT 2007/12/17 09:39:37 1 record was deleted in this editing session. 22 changes in channel Salinity:T0:C0 -The following MERGE parameters were used: 2007/12/19 12:58:29 2007/12/19 12:58:30 2007/12/19 12:58: Merge Channel: Pressure [decibar] Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Scan_Number [n/a], Pressure [decibar], Temperature:Primary [deg C (ITS90)], Conductivity:Primary [S/m], Transmissivity [%/metre], Descent_Rate [m/s], Salinity:T0:C0 [PSS-78], Flag [n/a] Secondary Channels to Include: Fluorescence:URU:Seapoint [mg/m^3] Primary file : Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.edt Secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.delfl Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.delfl ------------------------------------------------------------------- -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:58 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 35.90 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure [decibar] Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2007/12/19 14:03:30 4 channels removed. -HEADER EDITS: 2007/12/19 14:03:52 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016003.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:11:17 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF 07 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 3 10/11 17:58:38 smpls 13177 to 15435 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 2259 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 2259 # span 1 = -0.573, 45.874 # span 2 = -5.3067, 11.9563 # span 3 = 0.092227, 3.618232 # span 4 = -1.1679, 88.7673 # span 5 = 0.0000e+00, 3.8681e+00 # span 6 = -1.430, 1.637 # span 7 = 0.6243, 32.2505 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 17:58:38 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:16, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0026.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:38, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-002 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:17, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-002 6.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:33, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0026. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:18, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0026.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* CTDEDIT was used to remove 1 record from the surface; salinity was cleaned lightly. Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0026.delfl ------------------------------------------------------------------- SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016003.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:11:17 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF 07 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 3 10/11 17:58:38 smpls 13177 to 15435 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 2259 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 2259 # span 1 = -0.573, 45.874 # span 2 = -5.3067, 11.9563 # span 3 = 0.092227, 3.618232 # span 4 = -1.1679, 88.7673 # span 5 = 0.0000e+00, 3.8681e+00 # span 6 = -1.430, 1.637 # span 7 = 0.6243, 32.2505 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 17:58:38 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:16, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0026.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:38, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-002 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:17, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-002 6.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:33, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0026. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:18, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0026.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* Fluorescence and Transmissivity are unedited and nominal, except that some records were removed in editing temperature and salinity. !--1--- ---2---- --3-- ---4---- ---5--- -6-- !Pressu Temperat Trans Salinity Fluores Numb !re ure: missi :T0:C0 cence: er_o ! Primary vity URU: ~bin ! Seapoin _rec ! t ords !------ -------- ----- -------- ------- ---- *END OF HEADER 0.3 11.9544 13.5 31.0970 1.360 3 0.9 11.9533 31.8 31.1091 1.336 10 1.9 11.9440 32.1 31.1370 1.277 8 3.0 11.9101 32.3 31.1964 1.143 10 4.0 11.8563 32.3 31.2982 1.065 10 4.9 11.7931 38.4 31.4474 0.924 10 6.0 11.7931 40.6 31.4683 0.906 8 6.9 11.7844 40.9 31.4785 0.893 10 7.9 11.7516 42.1 31.4963 0.807 10 9.0 11.6924 42.3 31.5341 0.833 7 9.9 11.6312 43.2 31.5752 0.772 6 10.9 11.6046 44.7 31.5903 0.731 9 11.9 11.5242 45.9 31.6373 0.704 7 13.0 11.4259 46.8 31.6943 0.672 6 13.9 11.3522 48.4 31.7453 0.626 8 14.9 11.2886 51.2 31.7797 0.659 8 15.9 11.2529 51.4 31.7892 0.642 6 17.0 11.2309 51.3 31.7964 0.601 8 17.9 11.2308 52.0 31.7995 0.624 7 19.0 11.2279 51.5 31.8009 0.548 6 20.0 11.2257 51.2 31.8010 0.581 4 20.9 11.2224 51.4 31.8018 0.493 5 22.0 11.2194 52.0 31.8032 0.453 9 23.0 11.2084 52.4 31.8065 0.434 6 23.9 11.1924 52.0 31.8113 0.351 8 24.9 11.1019 51.4 31.8564 0.342 5 25.9 10.9530 48.3 31.9220 0.354 6 27.0 10.8779 46.1 31.9507 0.316 9 28.0 10.8544 46.0 31.9555 0.410 10 28.9 10.8198 46.2 31.9685 0.338 9 29.9 10.7743 44.8 31.9872 0.308 5 30.9 10.7409 43.6 32.0018 0.313 5 32.0 10.7064 43.1 32.0248 0.296 5 33.0 10.5447 40.8 32.0816 0.298 9 34.0 10.4592 38.8 32.1073 0.321 8 35.0 10.2452 38.3 32.1717 0.299 9 36.0 10.0600 38.3 32.2195 0.358 10 37.0 10.0063 36.4 32.2334 0.319 10 38.0 10.0045 34.4 32.2332 0.284 8 39.0 10.0045 33.4 32.2344 0.259 9 40.0 10.0009 32.8 32.2372 0.267 9 41.0 9.9962 31.7 32.2387 0.259 10 42.0 9.9901 31.2 32.2387 0.279 8 43.0 9.9689 31.3 32.2429 0.262 8 44.0 9.9569 32.3 32.2456 0.285 10 44.9 9.9488 32.5 32.2475 0.263 9 45.7 9.9412 32.9 32.2494 0.281 5