*2007/12/19 14:03:52.87 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2007/10/11 23:07:05.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 114 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 8C67E100 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 0.25 112.55 2 Temperature:Primary 'deg C (ITS90)' 8.16486 10.36735 3 Transmissivity %/metre 0 52.36 4 Salinity:T0:C0 PSS-78 31.37634 33.02198 5 Fluorescence:URU:Seapoint mg/m^3 0.1253333 1.97 6 Number_of_bin_records n/a 2 10 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.delfl ------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro $END *ADMINISTRATION MISSION : 2007-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : JF 06 EVENT NUMBER : 22 LATITUDE : 48 32.96000 N ! (deg min) LONGITUDE : 124 42.99000 W ! (deg min) WATER DEPTH : 120 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature ' ' 4700 conductivity ' ' 3184 Pressure ' ' 0573 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR $END $REMARKS SOFTWARE VERSION 1.57 Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.delfl ------------------------------------------------------------------- SOFTWARE VERSION 1.57 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/12/14 14:47:17 3960 3960 CLEAN 5.0.2 2007/12/14 14:51:40 ? ? HDREDIT2 2.5.1 2007/12/14 15:05:58 ? ? ADTIMCH 4.3 2007/12/15 16:15:12 3918 3918 SHIFTDAT 3.4 2007/12/15 16:52:24 3918 3918 DELETE 6.3 2007/12/15 16:55:47 3918 953 CTDEDIT 4.61 2007/12/17 09:35:52 953 953 MERGE 3.3 2007/12/19 12:58:40 953 953 FILTERS 4.3 2007/12/19 13:12:04 953 953 BINAVE 4.1.1 2007/12/19 13:12:42 953 114 REMOVECH 8.0 2007/12/19 14:03:30 114 114 HDREDIT2 2.5.1 2007/12/19 14:03:52 ? ? $END $REMARKS -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:58 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 102.60 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT 2007/12/17 09:35:52 25 changes in channel Salinity:T0:C0 -The following MERGE parameters were used: 2007/12/19 12:58:29 2007/12/19 12:58:30 2007/12/19 12:58: Merge Channel: Pressure [decibar] Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Scan_Number [n/a], Pressure [decibar], Temperature:Primary [deg C (ITS90)], Conductivity:Primary [S/m], Transmissivity [%/metre], Descent_Rate [m/s], Salinity:T0:C0 [PSS-78], Flag [n/a] Secondary Channels to Include: Fluorescence:URU:Seapoint [mg/m^3] Primary file : Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.edt Secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.delfl Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.delfl ------------------------------------------------------------------- -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:58 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 102.60 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure [decibar] Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2007/12/19 14:03:30 4 channels removed. -HEADER EDITS: 2007/12/19 14:03:52 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016002.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:09:04 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF 06 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 2 10/11 16:07:05 smpls 9217 to 13176 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3960 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3960 # span 1 = -0.596, 112.559 # span 2 = -4.4035, 10.9980 # span 3 = 0.060476, 3.508613 # span 4 = -1.1679, 87.9835 # span 5 = 0.0000e+00, 2.5201e+00 # span 6 = -1.960, 1.617 # span 7 = 0.5618, 33.0235 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 16:07:05 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:16, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0022.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:38, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-002 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:17, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-002 2.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:32, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0022. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:18, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0022.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* CTDEDIT was used to clean salinity lightly. Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0022.delfl ------------------------------------------------------------------- SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016002.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:09:04 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF 06 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 2 10/11 16:07:05 smpls 9217 to 13176 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3960 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3960 # span 1 = -0.596, 112.559 # span 2 = -4.4035, 10.9980 # span 3 = 0.060476, 3.508613 # span 4 = -1.1679, 87.9835 # span 5 = 0.0000e+00, 2.5201e+00 # span 6 = -1.960, 1.617 # span 7 = 0.5618, 33.0235 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 16:07:05 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:16, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0022.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:38, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-002 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:17, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-002 2.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:32, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0022. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:18, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0022.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* Fluorescence and Transmissivity are unedited and nominal, except that some records were removed in editing temperature and salinity. !--1--- ---2---- --3-- ---4---- ---5--- -6-- !Pressu Temperat Trans Salinity Fluores Numb !re ure: missi :T0:C0 cence: er_o ! Primary vity URU: ~bin ! Seapoin _rec ! t ords !------ -------- ----- -------- ------- ---- *END OF HEADER 0.2 10.3673 0.0 31.3764 1.970 4 0.9 10.3666 19.8 31.3763 1.915 10 1.9 10.3631 33.3 31.3767 1.866 9 3.0 10.3618 33.5 31.3766 1.911 8 4.0 10.3627 33.4 31.3766 1.953 10 5.0 10.3634 33.5 31.3763 1.951 9 5.9 10.3597 33.6 31.3771 1.872 10 6.9 10.3497 33.3 31.3783 1.745 10 7.9 10.3358 33.6 31.3793 1.630 10 8.9 10.2989 34.0 31.3824 1.283 9 10.0 10.2473 35.0 31.3889 1.067 9 10.9 10.2067 35.4 31.4049 0.993 10 11.9 10.1903 35.3 31.4848 0.794 10 12.9 10.3168 36.3 31.5697 0.592 10 13.9 10.0410 42.1 31.5752 0.574 10 14.9 9.7646 46.7 31.6045 0.654 9 15.9 9.6598 44.7 31.6215 0.584 10 16.9 9.5465 42.8 31.6443 0.490 9 18.0 9.4238 41.8 31.7229 0.461 8 19.0 9.4297 42.6 31.7645 0.458 8 20.0 9.4341 43.8 31.8320 0.496 6 21.0 9.4367 45.5 31.8703 0.499 6 21.8 9.4364 46.6 31.8830 0.498 7 22.9 9.4335 47.1 31.8883 0.532 8 24.0 9.4284 46.8 31.8964 0.556 9 24.9 9.4076 46.5 31.9464 0.560 9 25.9 9.4011 46.7 31.9574 0.574 6 27.0 9.3982 46.9 31.9641 0.560 8 27.9 9.3952 47.8 31.9733 0.556 8 29.0 9.3871 48.4 31.9774 0.532 8 30.0 9.3462 48.7 31.9850 0.531 10 31.0 9.2665 49.2 32.0137 0.542 7 32.0 9.1884 49.2 32.0549 0.537 7 32.9 9.1528 49.9 32.0787 0.535 8 33.9 9.1402 50.6 32.0878 0.489 9 35.0 9.0996 50.8 32.1224 0.434 8 35.9 9.0672 50.9 32.1491 0.404 7 37.0 9.0113 51.0 32.1807 0.385 10 38.0 8.9940 51.0 32.1897 0.364 9 39.0 8.9862 50.6 32.1940 0.350 9 39.9 8.9770 50.4 32.1967 0.322 9 41.0 8.9645 49.7 32.2023 0.318 6 42.0 8.9538 48.8 32.2080 0.315 7 43.0 8.9468 48.5 32.2126 0.303 8 43.9 8.9413 48.3 32.2149 0.295 9 45.0 8.9351 48.0 32.2175 0.297 10 46.0 8.9333 47.7 32.2171 0.295 10 47.0 8.9336 47.8 32.2170 0.288 9 48.0 8.9336 47.6 32.2170 0.285 10 48.9 8.9332 47.3 32.2183 0.286 9 50.0 8.9344 47.6 32.2198 0.280 10 51.0 8.9356 47.9 32.2231 0.278 9 51.9 8.9334 48.4 32.2260 0.273 8 52.9 8.9291 49.2 32.2266 0.264 7 53.9 8.9181 49.5 32.2343 0.250 6 55.0 8.8904 49.8 32.2592 0.236 7 55.9 8.8502 50.3 32.2766 0.233 8 57.0 8.8291 51.6 32.2883 0.213 10 58.0 8.8072 52.2 32.3179 0.211 10 59.0 8.7916 52.4 32.3299 0.188 10 60.0 8.7771 52.3 32.3429 0.185 10 60.9 8.7735 52.2 32.3591 0.181 8 62.0 8.7695 52.3 32.3683 0.175 8 62.9 8.7666 51.9 32.3787 0.181 8 64.0 8.7629 51.3 32.3947 0.178 8 65.0 8.7600 50.2 32.4062 0.180 7 66.0 8.7346 49.6 32.4558 0.176 8 66.9 8.7116 48.8 32.4865 0.175 10 67.9 8.7008 46.5 32.4973 0.173 8 68.8 8.6926 44.8 32.5061 0.175 6 70.0 8.6712 43.5 32.5257 0.172 6 71.0 8.6420 43.5 32.5534 0.171 9 71.9 8.6258 42.8 32.5683 0.177 9 72.9 8.6001 41.5 32.5940 0.181 8 73.9 8.5800 40.0 32.6121 0.169 6 75.0 8.5677 39.7 32.6227 0.163 7 76.0 8.5452 39.6 32.6407 0.161 7 76.9 8.5106 39.7 32.6714 0.163 9 77.9 8.4983 39.8 32.6825 0.160 10 79.0 8.4874 39.8 32.6930 0.159 9 79.9 8.4718 40.2 32.7066 0.151 6 81.0 8.4525 40.3 32.7240 0.162 9 82.0 8.4520 41.0 32.7245 0.155 7 82.9 8.4557 41.1 32.7210 0.153 7 83.9 8.4531 40.8 32.7237 0.155 6 84.9 8.4454 40.8 32.7310 0.154 8 86.0 8.4177 40.8 32.7574 0.142 5 87.0 8.3141 40.7 32.8587 0.138 5 88.0 8.2667 41.0 32.9084 0.136 9 88.9 8.2579 42.2 32.9168 0.132 10 89.9 8.2343 42.3 32.9433 0.126 10 90.9 8.1990 42.6 32.9881 0.131 10 91.9 8.2080 42.4 32.9745 0.130 10 92.9 8.2064 42.5 32.9772 0.127 10 94.0 8.2039 42.5 32.9804 0.128 9 95.0 8.1881 42.2 33.0029 0.129 7 95.9 8.1857 42.0 33.0062 0.135 8 96.9 8.1819 41.6 33.0106 0.127 10 97.9 8.1807 41.2 33.0122 0.130 9 98.9 8.1744 41.4 33.0176 0.130 8 99.9 8.1737 41.0 33.0191 0.136 10 101.0 8.1738 41.4 33.0190 0.137 7 101.9 8.1743 41.0 33.0188 0.130 7 103.0 8.1745 40.8 33.0174 0.132 9 103.9 8.1715 40.4 33.0179 0.142 9 105.0 8.1719 39.4 33.0179 0.129 9 105.9 8.1690 39.4 33.0195 0.139 10 106.9 8.1672 39.5 33.0201 0.137 10 107.9 8.1669 39.1 33.0200 0.125 9 108.9 8.1654 38.4 33.0220 0.133 7 110.0 8.1676 38.1 33.0198 0.135 7 110.9 8.1693 38.4 33.0186 0.138 10 111.9 8.1649 38.7 33.0200 0.134 10 112.6 8.1656 38.7 33.0191 0.136 2