*2007/12/19 14:03:52.64 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2007/10/11 19:37:10.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 107 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9F8F80ED NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.1 106.9 2 Temperature:Primary 'deg C (ITS90)' 7.949056 10.60749 3 Transmissivity %/metre 28.37778 51.2 4 Salinity:T0:C0 PSS-78 31.92062 33.04541 5 Fluorescence:URU:Seapoint mg/m^3 0.15 0.7965 6 Number_of_bin_records n/a 6 10 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.delfl ------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro $END *ADMINISTRATION MISSION : 2007-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : JF04 EVENT NUMBER : 16 LATITUDE : 48 27.49000 N ! (deg min) LONGITUDE : 124 20.57000 W ! (deg min) WATER DEPTH : 118 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature ' ' 4700 conductivity ' ' 3184 Pressure ' ' 0573 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR $END $REMARKS SOFTWARE VERSION 1.57 Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.delfl ------------------------------------------------------------------- SOFTWARE VERSION 1.57 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/12/14 14:47:15 3887 3887 CLEAN 5.0.2 2007/12/14 14:51:38 ? ? HDREDIT2 2.5.1 2007/12/14 15:05:56 ? ? ADTIMCH 4.3 2007/12/15 16:15:11 3501 3501 SHIFTDAT 3.4 2007/12/15 16:52:23 3501 3501 DELETE 6.3 2007/12/15 16:55:45 3501 1029 CTDEDIT 4.61 2007/12/17 09:28:34 1029 1025 MERGE 3.3 2007/12/19 12:58:37 1025 1025 FILTERS 4.3 2007/12/19 13:12:04 1025 1025 BINAVE 4.1.1 2007/12/19 13:12:42 1025 107 REMOVECH 8.0 2007/12/19 14:03:29 107 107 HDREDIT2 2.5.1 2007/12/19 14:03:52 ? ? $END $REMARKS -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:56 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 97.30 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT 2007/12/17 09:28:34 4 records were deleted in this editing session. 6 changes in channel Salinity:T0:C0 -The following MERGE parameters were used: 2007/12/19 12:58:29 2007/12/19 12:58:30 2007/12/19 12:58: Merge Channel: Pressure [decibar] Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Scan_Number [n/a], Pressure [decibar], Temperature:Primary [deg C (ITS90)], Conductivity:Primary [S/m], Transmissivity [%/metre], Descent_Rate [m/s], Salinity:T0:C0 [PSS-78], Flag [n/a] Secondary Channels to Include: Fluorescence:URU:Seapoint [mg/m^3] Primary file : Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.edt Secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.delfl Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.delfl ------------------------------------------------------------------- -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:56 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 97.30 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure [decibar] Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2007/12/19 14:03:29 4 channels removed. -HEADER EDITS: 2007/12/19 14:03:52 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016000.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:04:14 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF07 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 0 10/11 12:37:10 smpls 0 to 3886 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3887 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3887 # span 1 = -0.486, 107.340 # span 2 = -3.6140, 11.4625 # span 3 = 0.090662, 3.592212 # span 4 = -1.1679, 93.5207 # span 5 = 0.0000e+00, 8.3883e-01 # span 6 = -1.016, 1.219 # span 7 = 0.7193, 33.0476 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 12:37:10 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:15, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0016.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:37, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-001 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:16, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-001 6.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:32, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0016. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:17, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0016.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* CTDEDIT was used to remove surface records to 0.7db; salinity was cleaned lightly. Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0016.delfl ------------------------------------------------------------------- SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 016000.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 20:04:14 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF07 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 20:01:54.773 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.060 vmain = 12.7 iop = 178 vlith = 5.4 ncasts = 4 samples = 15436 free = 746805 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 0 10/11 12:37:10 smpls 0 to 3886 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3887 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3887 # span 1 = -0.486, 107.340 # span 2 = -3.6140, 11.4625 # span 3 = 0.090662, 3.592212 # span 4 = -1.1679, 93.5207 # span 5 = 0.0000e+00, 8.3883e-01 # span 6 = -1.016, 1.219 # span 7 = 0.7193, 33.0476 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 12:37:10 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:15, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0016.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:37, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-001 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:16, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-001 6.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:32, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0016. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:17, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0016.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* Fluorescence and Transmissivity are unedited and nominal, except that some records were removed in editing temperature and salinity. !--1--- ---2---- --3-- ---4---- ---5--- -6-- !Pressu Temperat Trans Salinity Fluores Numb !re ure: missi :T0:C0 cence: er_o ! Primary vity URU: ~bin ! Seapoin _rec ! t ords !------ -------- ----- -------- ------- ---- *END OF HEADER 1.1 10.6075 48.1 31.9479 0.383 7 2.0 10.5839 47.8 31.9507 0.461 10 3.0 10.4569 48.1 31.9739 0.539 10 4.0 10.2559 47.8 31.9664 0.600 10 4.9 10.0802 47.4 31.9471 0.636 10 5.9 10.0448 47.2 31.9445 0.672 10 6.9 10.0916 47.5 31.9664 0.674 10 7.9 9.9794 48.0 31.9935 0.675 10 8.9 9.8244 48.7 31.9826 0.688 10 9.9 9.6741 48.9 31.9638 0.708 10 10.9 9.5968 48.9 31.9507 0.708 10 11.9 9.5171 49.1 31.9467 0.714 8 13.0 9.4778 49.2 31.9422 0.723 8 14.0 9.4398 48.9 31.9402 0.731 9 14.9 9.3910 49.2 31.9355 0.722 10 15.9 9.3864 49.3 31.9349 0.731 10 16.9 9.3890 49.3 31.9366 0.749 9 18.0 9.3546 49.4 31.9344 0.752 9 19.0 9.3370 49.4 31.9318 0.748 10 20.0 9.3308 49.5 31.9314 0.752 10 21.0 9.3108 49.4 31.9284 0.756 10 22.0 9.2686 49.5 31.9250 0.777 10 23.0 9.2633 49.6 31.9242 0.765 10 24.0 9.2472 49.7 31.9237 0.790 10 25.0 9.2288 49.7 31.9221 0.797 10 26.0 9.2130 49.7 31.9206 0.784 10 27.0 9.1839 49.8 31.9236 0.768 9 28.0 9.1680 50.0 31.9351 0.730 10 29.0 9.1423 50.5 31.9543 0.674 10 29.9 9.1353 51.0 31.9584 0.658 9 30.9 9.1335 51.0 31.9594 0.658 9 32.0 9.1320 51.0 31.9602 0.646 10 33.0 9.1310 51.0 31.9614 0.640 10 34.0 9.1323 51.0 31.9627 0.643 10 35.0 9.1338 50.8 31.9634 0.638 10 36.0 9.1309 50.8 31.9650 0.621 10 37.0 9.1269 50.8 31.9691 0.603 10 38.0 9.1163 51.0 31.9740 0.583 10 39.0 9.1113 51.1 31.9784 0.570 8 39.9 9.1066 51.2 31.9825 0.557 9 41.0 9.1061 51.1 31.9840 0.556 9 41.9 9.1031 51.2 31.9882 0.544 9 43.0 9.1020 51.2 31.9917 0.542 10 44.0 9.1043 51.1 31.9959 0.546 10 44.9 9.1071 51.1 31.9996 0.538 8 46.0 9.1076 51.0 32.0014 0.528 8 47.0 9.1091 50.9 32.0034 0.533 10 48.0 9.1071 50.9 32.0071 0.530 10 49.0 9.1005 50.9 32.0158 0.514 7 49.9 9.0955 50.5 32.0237 0.504 8 51.0 9.0941 50.3 32.0403 0.502 6 52.0 9.0990 49.8 32.0528 0.502 8 53.0 9.0998 49.5 32.0550 0.510 10 53.9 9.0997 49.5 32.0585 0.515 8 55.0 9.0998 49.4 32.0613 0.515 10 56.0 9.0996 49.4 32.0692 0.512 9 57.0 9.0975 49.1 32.0740 0.515 10 58.0 9.0957 49.0 32.0770 0.518 9 59.0 9.0926 48.9 32.0808 0.527 10 60.0 9.0849 48.6 32.0878 0.526 10 61.0 9.0785 48.0 32.0949 0.534 10 62.0 9.0727 47.7 32.0986 0.532 10 63.0 9.0643 47.1 32.1084 0.518 10 64.0 9.0302 47.5 32.1461 0.452 10 65.0 8.9599 47.9 32.2073 0.430 9 65.9 8.9016 47.3 32.2547 0.412 10 66.9 8.8839 46.6 32.2677 0.402 10 67.9 8.8754 46.0 32.2741 0.393 10 68.9 8.8636 46.0 32.2844 0.373 10 69.9 8.8370 45.9 32.3082 0.373 10 70.9 8.8317 45.9 32.3128 0.361 10 71.9 8.8134 45.9 32.3290 0.357 10 73.0 8.8111 45.9 32.3309 0.355 9 73.9 8.8077 45.8 32.3338 0.334 10 74.9 8.7944 45.8 32.3459 0.332 10 75.9 8.7916 45.8 32.3481 0.318 10 76.9 8.7862 45.6 32.3524 0.331 10 77.9 8.7851 45.6 32.3535 0.327 10 78.9 8.7855 45.6 32.3532 0.333 10 79.9 8.7848 45.3 32.3537 0.332 10 80.9 8.7796 45.5 32.3582 0.324 10 82.0 8.7808 45.5 32.3573 0.326 9 82.9 8.7716 45.5 32.3655 0.322 10 83.9 8.7509 45.5 32.3827 0.307 10 84.9 8.7224 45.3 32.4060 0.289 10 85.9 8.6760 45.1 32.4455 0.263 10 86.9 8.5453 44.5 32.5532 0.244 10 87.9 8.5069 43.6 32.5829 0.234 10 88.9 8.4446 43.4 32.6334 0.222 10 89.9 8.4037 42.6 32.6676 0.220 10 91.0 8.3910 42.4 32.6794 0.202 9 91.9 8.3676 43.0 32.7002 0.200 10 92.9 8.3572 43.4 32.7095 0.189 10 93.9 8.3326 43.4 32.7316 0.187 10 94.9 8.2787 43.4 32.7834 0.176 10 95.9 8.2046 43.0 32.8411 0.170 10 96.9 8.1595 40.8 32.8742 0.170 10 97.9 8.1175 39.2 32.9075 0.166 10 98.9 8.0650 36.6 32.9492 0.164 10 99.9 8.0464 34.7 32.9640 0.159 9 100.9 8.0359 33.8 32.9726 0.159 8 101.9 8.0131 33.6 32.9922 0.163 10 102.9 8.0007 33.0 33.0022 0.156 10 103.9 7.9983 31.5 33.0043 0.150 10 104.9 7.9823 31.1 33.0181 0.158 10 105.9 7.9571 30.1 33.0390 0.161 10 106.9 7.9491 28.4 33.0454 0.159 9