*2007/12/19 14:03:52.51 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2007/10/11 17:45:29.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 81 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 8DA0558F NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.1 81.75 2 Temperature:Primary 'deg C (ITS90)' 9.02727 9.36935 3 Transmissivity %/metre 25.4 51.29 4 Salinity:T0:C0 PSS-78 31.85568 32.1353 5 Fluorescence:URU:Seapoint mg/m^3 0.3198333 0.5788 6 Number_of_bin_records n/a 6 10 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.delfl ------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2007-65\Pro $END *ADMINISTRATION MISSION : 2007-65 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : JF03 EVENT NUMBER : 14 LATITUDE : 48 23.70000 N ! (deg min) LONGITUDE : 124 5.50000 W ! (deg min) WATER DEPTH : 91 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature ' ' 4700 conductivity ' ' 3184 Pressure ' ' 0573 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR $END $REMARKS SOFTWARE VERSION 1.57 Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.delfl ------------------------------------------------------------------- SOFTWARE VERSION 1.57 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/12/14 14:47:14 3569 3569 CLEAN 5.0.2 2007/12/14 14:51:37 ? ? HDREDIT2 2.5.1 2007/12/14 15:05:55 ? ? ADTIMCH 4.3 2007/12/15 16:15:10 3073 3073 SHIFTDAT 3.4 2007/12/15 16:52:22 3073 3073 DELETE 6.3 2007/12/15 16:55:45 3073 791 CTDEDIT 4.61 2007/12/17 09:18:03 791 772 MERGE 3.3 2007/12/19 12:58:36 772 772 FILTERS 4.3 2007/12/19 13:12:04 772 772 BINAVE 4.1.1 2007/12/19 13:12:41 772 81 REMOVECH 8.0 2007/12/19 14:03:29 81 81 HDREDIT2 2.5.1 2007/12/19 14:03:52 ? ? $END $REMARKS -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:55 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 72.20 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT 2007/12/17 09:18:03 19 records were deleted in this editing session. 60 changes in channel Salinity:T0:C0 -The following MERGE parameters were used: 2007/12/19 12:58:29 2007/12/19 12:58:30 2007/12/19 12:58: Merge Channel: Pressure [decibar] Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Scan_Number [n/a], Pressure [decibar], Temperature:Primary [deg C (ITS90)], Conductivity:Primary [S/m], Transmissivity [%/metre], Descent_Rate [m/s], Salinity:T0:C0 [PSS-78], Flag [n/a] Secondary Channels to Include: Fluorescence:URU:Seapoint [mg/m^3] Primary file : Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.edt Secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.delfl Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.delfl ------------------------------------------------------------------- -CLEAN functions: 2007/12/14 14:51:37 20 Set event to last 4 characters of file name -HEADER EDITS: 2007/12/14 15:05:55 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt Channel 2: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section Change time zone to UTC in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.00 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint [mg/m^3] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 72.20 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure [decibar] Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2007/12/19 14:03:29 4 channels removed. -HEADER EDITS: 2007/12/19 14:03:52 Applied edit header: Q:\Cruise_Data_Processing\2007-65\Processing\doc\2007-65-header.txt $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 JF01002.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 11:08:59 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF03 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 11:05:25.709 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.949 vmain = 12.7 iop = 179 vlith = 5.3 ncasts = 3 samples = 14020 free = 748221 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 2 10/11 10:45:29 smpls 10451 to 14019 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3569 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3569 # span 1 = -0.579, 82.185 # span 2 = -3.7499, 11.6911 # span 3 = 0.105052, 3.529511 # span 4 = -1.1679, 84.6966 # span 5 = 0.0000e+00, 8.0220e-01 # span 6 = -1.026, 0.985 # span 7 = 0.7115, 32.5539 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 10:45:29 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:14, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0010.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:36, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-001 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:16, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-001 0.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:31, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0010. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:16, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0010.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* CTDEDIT was used to remove surface records to 1.7db and 1 record from the bottom of the cast; salinity was cleaned. Comments from secondary file: Q:\Cruise_Data_Processing\2007-65\Processing\ios\2007-65-0014.delfl ------------------------------------------------------------------- SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\data\Data\2007-65 JF01002.hex Software Version 1.57 Temperature SN = 4700 Conductivity SN = 3184 System UpLoad Time = Oct 11 2007 11:08:59 Ship: C.F.V.Viking Storm Cruise:2007-65 Station:JF03 Latitude: Longitude: ds SBE 25 CTD V 4.1c SN 0404 10/11/07 11:05:25.709 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32767.949 vmain = 12.7 iop = 179 vlith = 5.3 ncasts = 3 samples = 14020 free = 748221 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 2678 pump delay = 60 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 S> dh cast 2 10/11 10:45:29 smpls 10451 to 14019 nv = 2 avg = 1 stp = switch of S> # nquan = 9 # nvalues = 3569 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 5 = flSP: Fluorescence, Seapoint # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity [PSU] # name 8 = flag: flag # span 0 = 1, 3569 # span 1 = -0.579, 82.185 # span 2 = -3.7499, 11.6911 # span 3 = 0.105052, 3.529511 # span 4 = -1.1679, 84.6966 # span 5 = 0.0000e+00, 8.0220e-01 # span 6 = -1.026, 0.985 # span 7 = 0.7115, 32.5539 # span 8 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 11 2007 10:45:29 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, 4700, 29-Jul-06 # sensor 1 = Frequency 1 conductivity, 3184, 04-Aug-06, cpcor = -9.5700e-08 # sensor 2 = Pressure Voltage, 0573, 22-May-06, cpcor = -9.5700e-08 # sensor 3 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 4 = Extrnl Volt 1 transmissometer, primary, 498DR, 3-Oct-07 # datcnv_date = Dec 14 2007 13:00:14, 7.12 # datcnv_in = Q:\Cruise_Data_Processing\2007-65\RAW\CTD\2007-65-0010.hex Q:\Crui se_Data_Processing\2007-65\Processing\doc\0404ctd.con # datcnv_skipover = 0 # wildedit_date = Dec 14 2007 13:10:36, 7.12 # wildedit_in = Q:\Cruise_Data_Processing\2007-65\Processing\convert\2007-65-001 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 20.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 25 # wildedit_vars = prSM t090C c0S/m # wildedit_excl_bad_scans = yes # wfilter_date = Dec 14 2007 13:16:16, 7.12 # wfilter_in = Q:\Cruise_Data_Processing\2007-65\Processing\wildedit\2007-65-001 0.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # celltm_date = Dec 14 2007 14:40:31, 7.12 # celltm_in = Q:\Cruise_Data_Processing\2007-65\Processing\wfilter\2007-65-0010. cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Dec 14 2007 14:42:16, 7.12 # Derive_in = Q:\Cruise_Data_Processing\2007-65\Processing\celltm\2007-65-0010.c nv Q:\Cruise_Data_Processing\2007-46\Processing\doc\2007-46-ctd.CON # file_type = ascii END* Fluorescence and Transmissivity are unedited and nominal, except that some records were removed in editing temperature and salinity. !--1--- ---2---- --3-- ---4---- ---5--- -6-- !Pressu Temperat Trans Salinity Fluores Numb !re ure: missi :T0:C0 cence: er_o ! Primary vity URU: ~bin ! Seapoin _rec ! t ords !------ -------- ----- -------- ------- ---- *END OF HEADER 2.1 9.3694 50.0 31.8557 0.320 6 3.0 9.3579 49.7 31.8568 0.335 10 4.0 9.3277 49.3 31.8592 0.406 10 4.9 9.3366 47.3 31.8725 0.397 10 5.9 9.3124 48.6 31.9094 0.393 10 6.9 9.2290 48.5 31.9628 0.374 10 7.9 9.2264 48.5 31.9663 0.431 10 8.9 9.2277 48.2 31.9644 0.442 10 10.0 9.2277 48.4 31.9647 0.472 9 10.9 9.2284 47.9 31.9643 0.489 8 11.9 9.2297 48.4 31.9629 0.523 10 12.9 9.2305 48.4 31.9620 0.579 10 13.9 9.2296 48.3 31.9623 0.565 10 14.9 9.2288 48.4 31.9629 0.567 10 15.9 9.2273 48.5 31.9644 0.546 9 17.0 9.2253 48.5 31.9655 0.543 10 18.0 9.2268 48.6 31.9643 0.555 9 19.0 9.2273 48.6 31.9677 0.561 10 20.0 9.2195 48.6 31.9804 0.536 9 21.0 9.2087 48.3 31.9887 0.531 10 21.9 9.2008 48.0 31.9895 0.510 9 23.0 9.1558 48.5 31.9879 0.496 10 24.0 9.1073 49.3 31.9852 0.471 10 25.0 9.0768 50.7 31.9828 0.471 9 26.0 9.0790 50.8 31.9836 0.456 10 27.0 9.0806 50.8 31.9853 0.446 10 28.0 9.0758 50.7 31.9882 0.446 10 28.9 9.0683 50.8 31.9904 0.433 9 30.0 9.0693 50.7 31.9907 0.434 10 31.0 9.0658 51.0 31.9907 0.428 10 32.0 9.0636 50.8 31.9918 0.412 9 33.0 9.0533 50.9 31.9937 0.417 10 34.0 9.0510 51.1 31.9969 0.418 9 35.0 9.0488 51.0 32.0014 0.425 10 36.0 9.0475 51.3 32.0034 0.415 10 37.0 9.0461 51.3 32.0115 0.410 10 38.0 9.0446 50.8 32.0164 0.421 9 39.0 9.0444 51.1 32.0162 0.424 9 39.9 9.0436 51.2 32.0153 0.420 9 41.0 9.0425 51.3 32.0151 0.425 9 42.0 9.0429 51.2 32.0155 0.413 10 43.0 9.0465 51.2 32.0173 0.409 10 44.0 9.0472 51.1 32.0177 0.410 8 45.0 9.0470 51.1 32.0178 0.413 10 46.0 9.0467 51.2 32.0180 0.413 10 47.0 9.0486 51.1 32.0177 0.411 9 48.0 9.0479 51.3 32.0181 0.409 10 48.9 9.0474 51.2 32.0182 0.420 9 50.0 9.0473 51.2 32.0182 0.408 10 51.0 9.0443 51.3 32.0184 0.410 10 51.9 9.0405 51.0 32.0226 0.408 9 53.0 9.0395 50.7 32.0296 0.412 10 54.0 9.0389 50.9 32.0295 0.414 10 54.9 9.0393 50.6 32.0308 0.407 9 56.0 9.0418 50.8 32.0363 0.411 9 57.0 9.0431 50.3 32.0468 0.422 7 57.9 9.0435 49.5 32.0520 0.420 8 59.0 9.0442 49.1 32.0534 0.416 10 60.0 9.0443 49.1 32.0546 0.417 10 61.0 9.0446 48.9 32.0565 0.420 10 62.0 9.0450 48.7 32.0594 0.431 10 63.0 9.0454 47.7 32.0637 0.429 10 64.0 9.0466 47.1 32.0671 0.423 10 64.9 9.0461 46.8 32.0675 0.426 10 66.0 9.0449 46.9 32.0674 0.429 9 66.9 9.0464 47.0 32.0674 0.426 10 67.9 9.0464 46.7 32.0689 0.427 10 68.9 9.0456 46.3 32.0709 0.434 10 70.0 9.0461 45.5 32.0792 0.456 9 70.9 9.0446 42.2 32.0881 0.462 10 71.9 9.0428 40.6 32.0928 0.472 10 72.9 9.0360 38.3 32.1008 0.473 10 73.9 9.0320 36.2 32.1062 0.470 10 74.9 9.0331 36.5 32.1045 0.476 10 75.9 9.0353 37.2 32.1043 0.489 9 76.9 9.0337 32.9 32.1217 0.497 10 77.9 9.0340 30.9 32.1257 0.498 10 78.9 9.0336 28.8 32.1253 0.500 10 79.9 9.0281 27.8 32.1342 0.510 10 80.9 9.0273 25.4 32.1353 0.499 10 81.8 9.0277 26.4 32.1349 0.508 6