*2014/11/20 09:55:47.23 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2007/04/04 22:42:45.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 22 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : A8D4B236 NUMBER OF CHANNELS : 23 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 22 2 Pressure decibar 2.331 366.668 3 Temperature:Secondary 'deg C (ITS90)' 7.8225 9.6432 4 Transmissivity %/metre 1.3 54.3 5 Fluorescence:URU:Seapoint mg/m^3 0.65E-01 14.856 6 Oxygen:Dissolved:SBE mL/L 2.463 8.978 7 Oxygen:Dissolved:SBE umol/kg 107.3761 392.8494 8 PAR uE/m^2/sec 0 257.841 9 Salinity:T1:C1 PSS-78 26.095 31.1703 10 Sample_Number n/a 151 172 11 Number_of_bin_records n/a 53 121 12 Salinity:Bottle PSS-78 31.1686 31.1686 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.28 25.1 15 Flag:Chlorophyll:Extracted n/a 16 Oxygen:Dissolved mL/L 2.489 8.988 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 7.4 31.4 19 Flag:Nitrate_plus_Nitrite n/a 20 Silicate umol/L 21.5 66.8 21 Flag:Silicate n/a 22 Phosphate umol/L 0.92 2.99 23 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 5 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' 8 F ' ' 3 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' 6 F R4 1 21 0 ' ' 2 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2007-26 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : SoG/JdF SCIENTIST : Masson D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia & Juan de Fuca Strait STATION : 39 EVENT NUMBER : 45 LATITUDE : 49 9.80000 N ! (deg min) LONGITUDE : 123 33.00000 W ! (deg min) ALTIMETER (M) : 9.94 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2968 conductivity:primary ' ' 1766 pressure ' ' 75636 temperature:secondary ' ' 2374 conductivity:secondary ' ' 1729 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005 Oxygen:SBE ' ' 1117 altimeter: ' ' ' ' irradiance:primary ' ' 4656 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.37C $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/05/24 14:52:53 2460 2460 ADDSAMP 3.4 2007/05/25 11:59:16 2460 2460 BINAVE 4.1.1 2007/05/25 12:00:11 2460 22 MERGE 3.3 2007/08/27 09:37:54 22 22 CLEAN 5.0.2 2007/08/27 09:38:46 ? ? CALIB 11.7 2007/08/27 10:30:21 22 22 SORT 3.5 2007/08/27 11:07:17 22 22 REMOVECH 8.0 2007/08/27 11:07:41 22 22 CHGUNITS 3.0 2007/08/27 11:09:42 22 22 REORDER 1.2.1 2007/08/27 11:18:17 ? ? HDREDIT2 2.5.1 2007/08/27 11:39:22 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:48:50 22 22 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:13 22 22 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/18 15:51:35 22 22 CHANGE_FLAGS 2.0 2014/11/20 09:55:47 22 22 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2007-26\processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2007/08/27 09:37:52 2007/08/27 09:37:52 2007/08/27 09:37: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data_Processing\2007-26\Processing\hydro\2007-26-0045.samavg Secondary file: Q:\Cruise_Data_Processing\2007-26\Processing\hydro\2007-26-0045.mrgcln1 -CLEAN functions: 2007/08/27 09:38:45 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2007/08/27 10:30:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2007-14\Processing\hydro\2007-26-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 0.2300000E-01 0.1027400E+01 -SORT parameters: 2007/08/27 11:07:17 Sorted in ascending order of channel Pressure -REMOVECH 2007/08/27 11:07:41 10 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2007/08/27 11:39:22 Applied edit header: Q:\Cruise_Data_Processing\2007-26\Processing\doc\2007-26-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 8: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 $END *COMMENTS Sample_Number 168: Extracted Chlorophyll: variability > 10% Sample_Number 169: Extracted Chlorophyll: variability > 10% Sample_Number 172: Extracted Chlorophyll: one sample only Sample_number 171: Dissolved Oxygen: outlier in plot of DO versus salinity. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8400B Autosal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed frozen using the Astoria Analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Average of two samples is reported. Variability is assessed as the % (std dev/mean*100). References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.23E-01 1.0274) $END !1- --2--- ---3---- --4-- ---5--- --6--- --7-- --8--- ---9---- -10- -11- ---12--- - --14-- - ---16-- - --18- - --20- - --22-- - !Bo Pressu Temperat Trans Fluores Oxygen Oxyge PAR Salinity Samp Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F !tt re ure: missi cence: : n: :T1:C1 le_ er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l !~u Secondar vity URU: Dissol Disso Numb ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ !mb y Seapoin ved: lved: er _rec l ted e e Nitri t t t !er t SBE SBE ords e d d te e e e !-- ------ -------- ----- ------- ------ ----- ------ -------- ---- ---- -------- - ------ - ------- - ----- - ----- - ------ - *END OF HEADER 22 2.3 8.3282 1.3 14.856 8.98 392.8 257.8 26.0950 172 121 -99.0000 0 25.10 3 8.988 0 7.4 0 21.5 0 0.92 0 21 6.1 8.1620 23.5 6.678 7.40 323.6 14.0 27.4294 171 121 -99.0000 0 10.69 0 6.055 3 -99.0 0 -99.0 0 -99.00 0 20 11.2 8.0127 37.7 2.187 6.94 303.1 2.0 27.9623 170 121 -99.0000 0 1.77 0 6.276 0 20.3 0 38.4 0 1.95 0 19 21.2 7.8225 54.3 0.130 6.27 273.9 0.3 28.8123 169 121 -99.0000 0 0.28 3 6.188 0 -99.0 0 -99.0 0 -99.00 0 18 31.3 7.8882 53.8 0.174 6.14 268.2 0.1 28.9042 168 121 -99.0000 0 0.39 3 6.096 0 24.1 0 46.4 0 2.31 0 17 41.3 8.0082 48.6 0.229 5.78 252.5 0.0 29.1725 167 121 -99.0000 0 -99.00 0 5.687 0 -99.0 0 -99.0 0 -99.00 0 16 51.2 7.9915 47.9 0.152 5.49 239.5 0.0 29.5597 166 121 -99.0000 0 -99.00 0 5.491 0 27.0 0 49.1 0 2.32 0 15 76.2 7.9680 38.9 0.168 5.59 243.8 0.0 29.8479 165 121 -99.0000 0 -99.00 0 5.608 0 -99.0 0 -99.0 0 -99.00 0 14 101.2 7.9535 44.2 0.127 5.41 236.2 0.0 30.0123 164 121 -99.0000 0 -99.00 0 5.390 0 27.5 0 47.2 0 2.23 0 12 126.2 7.9508 43.9 0.105 5.18 225.7 0.0 30.1859 162 121 -99.0000 0 -99.00 0 -99.000 0 28.9 0 50.6 0 2.36 0 13 126.2 7.9511 44.0 0.123 5.17 225.7 0.0 30.1741 163 121 -99.0000 0 -99.00 0 5.173 0 -99.0 0 -99.0 0 -99.00 0 11 151.1 8.3106 48.9 0.079 4.57 199.3 0.0 30.3694 161 121 -99.0000 0 -99.00 0 4.579 0 -99.0 0 -99.0 0 -99.00 0 10 151.1 8.3110 48.3 0.080 4.57 199.4 0.0 30.3687 160 121 -99.0000 0 -99.00 0 -99.000 0 30.6 0 54.5 0 2.47 0 8 176.2 8.6672 44.9 0.079 4.01 174.7 0.0 30.6281 158 121 -99.0000 0 -99.00 0 -99.000 0 28.1 0 59.2 0 2.74 0 9 176.2 8.6762 44.9 0.080 4.00 174.3 0.0 30.6314 159 121 -99.0000 0 -99.00 0 3.991 0 -99.0 0 -99.0 0 -99.00 0 6 201.2 9.2370 48.2 0.071 3.25 141.6 0.0 30.9080 156 57 -99.0000 0 -99.00 0 -99.000 0 31.0 0 59.9 0 2.71 0 7 201.2 9.2176 48.4 0.068 3.24 141.3 0.0 30.8981 157 120 -99.0000 0 -99.00 0 3.288 0 -99.0 0 -99.0 0 -99.00 0 4 251.0 9.5936 49.7 0.066 2.73 119.2 0.0 31.0797 154 54 -99.0000 0 -99.00 0 -99.000 0 31.4 0 54.2 0 2.39 0 5 251.0 9.5607 49.7 0.065 2.73 118.9 0.0 31.0610 155 120 -99.0000 0 -99.00 0 2.796 0 -99.0 0 -99.0 0 -99.00 0 3 300.9 9.6055 48.5 0.066 2.62 114.4 0.0 31.1297 153 121 -99.0000 0 -99.00 0 2.614 0 -99.0 0 -99.0 0 -99.00 0 1 366.6 9.6426 38.4 0.075 2.46 107.4 0.0 31.1700 151 53 -99.0000 0 -99.00 0 2.489 0 -99.0 9 -99.0 9 -99.00 9 2 366.7 9.6432 38.2 0.076 2.47 107.7 0.0 31.1703 152 120 31.1686 0 -99.00 0 -99.000 0 30.3 0 66.8 0 2.99 0