*2014/11/20 09:55:23.55 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2007/02/18 21:26:39.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : C5DEE147 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 386 409 2 Bottle_Number n/a 1 24 3 Pressure decibar 7.2 2007.3 4 Temperature:Secondary 'deg C (ITS90)' 1.9426 6.7242 5 Transmissivity %/metre 52 56.2 6 Fluorescence:URU:Seapoint mg/m^3 0.32E-01 0.638 7 Oxygen:Dissolved:SBE mL/L 1.32 6.97 8 Oxygen:Dissolved:SBE umol/kg 57.4 303.4 9 Salinity:T1:C1 PSS-78 32.4957 34.5847 10 Number_of_bin_records n/a 121 121 11 Salinity:Bottle PSS-78 32.4917 34.6834 12 Flag:Salinity:Bottle n/a 13 Chlorophyll:Extracted mg/m^3 0.45 0.45 14 Flag:Chlorophyll:Extracted n/a 15 Oxygen:Dissolved mL/L 6.952 6.952 16 Flag:Oxygen:Dissolved n/a 17 Nitrate_plus_Nitrite umol/L 11 11 18 Flag:Nitrate_plus_Nitrite n/a 19 Silicate umol/L 11.1 11.1 20 Flag:Silicate n/a 21 Phosphate umol/L 1.16 1.16 22 Flag:Phosphate n/a 23 Carbon:Dissolved:Inorganic umol/kg 2387.53 2389.46 24 Flag:Carbon:Dissolved:Inorganic n/a 25 Alkalinity:Total umol/kg 2413.3 2417.8 26 Flag:Alkalinity:Total n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 2 NQ C ' ' 13 -99 ' ' 7 F R4 2 14 0 ' ' 2 NQ C ' ' 15 -99 ' ' 8 F ' ' 3 16 0 ' ' 2 NQ C ' ' 17 -99 ' ' ' ' F6.1 R4 ' ' 18 0 ' ' 2 NQ C ' ' 19 -99 ' ' ' ' F6.1 R4 ' ' 20 0 ' ' 2 NQ C ' ' 21 -99 ' ' ' ' F7.2 R4 ' ' 22 0 ' ' 2 NQ C ' ' 23 -99 ' ' ' ' F8.2 R4 ' ' 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' ' ' F7.1 R4 ' ' 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2007-01 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : R11 S EVENT NUMBER : 92 LATITUDE : 50 49.98000 N ! (deg min) LONGITUDE : 136 40.29000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 2424 pressure ' ' 63507 temperature:secondary ' ' 2668 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953 Oxygen:SBE ' ' 1117 altimeter: ' ' ' ' irradiance:primary ' ' 4656 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.37C $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/03/09 18:27:41 2904 2904 CLEAN 5.0 2007/03/11 13:14:01 ? ? ADDSAMP 3.4 2007/03/13 09:53:00 2904 2904 BINAVE 4.1.1 2007/03/13 09:53:57 2904 24 MERGE 3.3 2007/03/13 14:54:55 24 24 CLEAN 5.0 2007/03/19 12:47:56 ? ? CALIB 11.7 2007/03/23 14:31:51 24 24 SORT 3.5 2007/03/26 16:14:56 24 24 REMOVECH 7.0 2007/03/26 16:18:11 24 24 CHGUNITS 3.0 2007/03/26 16:19:02 24 24 REORDER 1.2.1 2007/03/26 16:19:40 ? ? HDREDIT2 2.5.1 2007/03/26 16:24:58 ? ? SORT 3.5 2008/12/03 10:05:44 24 24 MERGE 3.3 2008/12/03 10:06:17 24 24 MERGE 3.3 2008/12/03 10:07:53 24 24 MERGE 3.3 2009/01/12 10:33:40 24 24 HDREDIT2 2.5.1 2009/01/12 11:12:34 ? ? SORT 3.5 2010/04/18 15:16:11 24 24 MERGE 3.3 2010/04/18 15:16:30 24 24 HDREDIT2 2.5.1 2010/04/18 15:22:24 ? ? SORT 3.5 2010/04/18 15:23:33 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:48:32 24 24 SORT 3.6 2013/10/08 11:19:51 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:32:53 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:55:23 24 24 $END $REMARKS -CLEAN functions: 2007/03/11 13:13:05 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2007-01\ctd\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2007/03/13 14:54:51 2007/03/13 14:54:51 2007/03/13 14:54: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2007-01\CTD\hydro\2007-01-0092.samavg Secondary file: Q:\Cruise_Data\2007-01\CTD\hydro\2007-01-0092.mrgcln1 -CLEAN functions: 2007/03/19 12:47:53 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2007/03/23 14:31:51 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2007-01\CTD\hydro\2007-01-0443.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.1420000E-01 0.9893000E+00 -SORT parameters: 2007/03/26 16:14:56 Sorted in ascending order of channel Pressure -REMOVECH 2007/03/26 16:18:11 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] PAR [uE/m^2/sec] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2007/03/26 16:24:58 Applied edit header: Q:\Cruise_Data\2007-01\CTD\doc\2007-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -SORT parameters: 2008/12/03 10:05:44 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2008/12/03 10:06:14 2008/12/03 10:06:14 2008/12/03 10:06: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.che2 Secondary file: Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.chl -The following MERGE parameters were used: 2008/12/03 10:07:49 2008/12/03 10:07:49 2008/12/03 10:07: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite [umol/L], Flag:Nitrate_plus_Nitrite [ ], Silicate [umol/L], Flag:Silicate [ ], Phosphate [umol/L], Flag:Phosphate [ ] Primary file : Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.che3 Secondary file: Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.nut -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.che4 Secondary file: Q:\Cruise_Data_Processing\Archive-updates\2007-01\2007-01-0092.dms -HEADER EDITS: 2009/01/12 11:12:34 - none. -SORT parameters: 2010/04/18 15:16:11 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/04/18 15:16:29 2010/04/18 15:16:29 2010/04/18 15:16: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2007-01\2007-01-0092.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2007-01\2007-01-0092.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2007-01\2007-01-0092.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/04/18 15:15:48 Sorted in ascending order of channel Sample_Number -HEADER EDITS: 2010/04/18 15:22:24 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK.txt -SORT parameters: 2010/04/18 15:23:33 Sorted in ascending order of channel Pressure -SORT parameters: 2013/10/08 11:19:51 Sorted in ascending order of channel Pressure* $END *COMMENTS Sample_Number 398: Salinity Sample: Standard deviation high but compares well with the CTD data in COMPARE. Salinity Sample #400: severe outlier in COMPARE and stands out as wrong in profile. Dissolved Oxygen Sample #409 is listed as 409a on the rosette log sheet. All Salinity Samples from this cruise with sample numbers >400 and higher are believed to have values that are too high by about 0.0045. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8400B Autosal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were analyzed fresh at sea by Janet Barwell-Clarke using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs Model 10 fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Chlorophyll samples were analyzed on board ship by Marie Robert. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. Complete documentation on DIC and ALK sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2007-01\2007-01-0092.iossrt --------------------------------------------------------------------------- Sample_Number 387: Alk: Large difference between duplicates *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.142E-01 0.9893) $END !-1-- 2- --3--- ---4---- --5-- ---6--- --7--- --8-- ---9---- -10- ---11--- - --13-- - ---15-- - --17- - --19- - --21-- - ---23-- 24 --25-- 26 !Samp Bo Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F Carbon: Fl Alkali Fl !le_ tt re ure: missi cence: : n: :T1:C1 er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l Dissolv ag nity: ag !Numb ~u Secondar vity URU: Dissol Disso ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ ed: ~g Total ~T !er mb y Seapoin ved: lved: _rec l ted e e Nitri t t t Inorgan an ot ! er t SBE SBE ords e d d te e e e ic ic al !---- -- ------ -------- ----- ------- ------ ----- -------- ---- -------- - ------ - ------- - ----- - ----- - ------ - ------- -- ------ -- *END OF HEADER 409 24 7.2 6.7242 52.0 0.638 6.97 303.4 32.4957 121 32.4917 4 0.45 0 6.952 0 11.0 0 11.1 0 1.16 0 -99.00 0 -99.0 0 399 14 2003.7 1.9448 56.2 0.033 1.32 57.4 34.5842 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 395 10 2003.8 1.9449 56.2 0.033 1.32 57.5 34.5842 121 34.5848 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 394 9 2003.9 1.9446 56.2 0.032 1.33 57.6 34.5843 121 34.5832 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 398 13 2003.9 1.9455 56.2 0.032 1.32 57.5 34.5841 121 34.5850 2 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 397 12 2004.0 1.9452 56.2 0.033 1.32 57.5 34.5841 121 34.5831 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 396 11 2004.1 1.9452 56.2 0.033 1.32 57.5 34.5841 121 34.5834 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 405 20 2004.1 1.9439 56.2 0.033 1.33 57.6 34.5845 121 34.5779 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 391 6 2004.3 1.9448 56.2 0.033 1.32 57.5 34.5842 121 34.5830 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 400 15 2004.5 1.9440 56.2 0.032 1.32 57.5 34.5844 121 34.6834 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 392 7 2004.9 1.9446 56.2 0.033 1.32 57.5 34.5842 121 34.5837 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 393 8 2005.1 1.9442 56.2 0.033 1.33 57.6 34.5843 121 34.5835 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 403 18 2005.1 1.9439 56.2 0.033 1.33 57.6 34.5844 121 34.5819 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 406 21 2005.2 1.9438 56.2 0.032 1.33 57.6 34.5845 121 34.5782 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 401 16 2005.4 1.9444 56.2 0.033 1.32 57.5 34.5844 121 34.5789 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 389 4 2005.5 1.9440 56.2 0.033 1.33 57.6 34.5843 121 34.5828 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 2388.97 6 2415.8 6 390 5 2005.6 1.9440 56.2 0.033 1.33 57.6 34.5843 121 34.5830 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 2389.46 6 2413.3 6 408 23 2005.6 1.9426 56.2 0.033 1.33 57.6 34.5847 121 34.5784 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 386 1 2005.9 1.9447 56.2 0.033 1.33 57.6 34.5841 121 34.5840 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 2387.53 6 2414.4 6 402 17 2006.5 1.9437 56.2 0.032 1.33 57.6 34.5845 121 34.5832 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 404 19 2006.5 1.9434 56.2 0.033 1.33 57.6 34.5846 121 34.5796 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 407 22 2006.6 1.9426 56.2 0.033 1.33 57.6 34.5846 121 34.5774 4 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.0 0 388 3 2006.9 1.9440 56.2 0.033 1.33 57.6 34.5843 121 34.5838 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 2388.47 6 2417.8 6 387 2 2007.3 1.9441 56.2 0.032 1.33 57.6 34.5843 121 34.5835 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 2389.37 6 2416.1 36