*2014/11/20 09:55:20.59 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2006/12/01 03:16:10.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 16 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 216DC6B NUMBER OF CHANNELS : 23 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 16 2 Pressure decibar 2 336.7 3 Temperature:Primary 'deg C (ITS90)' 7.0804 10.0321 4 Transmissivity %/metre 49.5 56 5 Fluorescence:URU:Seapoint mg/m^3 0.47E-01 0.424 6 Oxygen:Dissolved:SBE mL/L 2.59 6.53 7 Oxygen:Dissolved:SBE umol/kg 112.8 285.6 8 PAR uE/m^2/sec 0 2.112 9 Salinity:T0:C0 PSS-78 27.3432 31.4292 10 Sample_Number n/a 126 141 11 Number_of_bin_records n/a 88 121 12 Salinity:Bottle PSS-78 31.4234 31.4234 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.59 0.59 15 Flag:Chlorophyll:Extracted n/a 16 Oxygen:Dissolved mL/L 2.634 6.523 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 27.4 30.2 19 Flag:Nitrate_plus_Nitrite n/a 20 Silicate umol/L 49.6 57.4 21 Flag:Silicate n/a 22 Phosphate umol/L 2.29 2.66 23 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 11 F ' ' 3 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 5 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' 8 F ' ' 3 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' 6 F R4 1 21 0 ' ' 2 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- Comments from secondary file: Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.par -------------------------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data\2006-35\CTD\par\2006-3 $END *ADMINISTRATION MISSION : 2006-35 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : SoG-JdeF SCIENTIST : Masson D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 27 EVENT NUMBER : 35 LATITUDE : 49 19.15000 N ! (deg min) LONGITUDE : 123 48.01000 W ! (deg min) WATER DEPTH : 343 ALTIMETER (M) : 9.96 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 2424 pressure ' ' 63507 temperature:secondary ' ' 2668 conductivity:secondary ' ' 2399 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953 Oxygen:SBE ' ' 1117 altimeter: ' ' ' ' irradiance:primary ' ' 4656 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.29B Comments from secondary file: Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.par ----------------------------------------------- SOFTWARE VERSION SEASAVE WIN32 V 5.29B $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/03/04 17:16:15 1903 1903 CLEAN 5.0 2007/03/04 17:18:49 1903 1903 ADDSAMP 3.4 2007/03/04 17:31:11 1903 1903 BINAVE 4.1.1 2007/03/05 10:59:20 1903 16 MERGE 3.3 2007/03/05 10:59:42 16 16 CLEAN 5.0 2007/03/16 15:24:49 ? ? CALIB 11.7 2007/03/16 15:25:21 16 16 SORT 3.5 2007/03/16 17:08:10 16 16 REMOVECH 7.0 2007/03/16 17:09:08 16 16 CHGUNITS 3.0 2007/03/16 17:09:48 16 16 REORDER 1.2.1 2007/03/16 17:10:01 ? ? HDREDIT2 2.5.1 2007/03/16 17:26:25 ? ? MERGE 3.3 2007/03/17 15:44:21 16 16 REORDER 1.2.1 2007/03/17 15:58:08 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:48:30 16 16 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:32:45 16 16 CHANGE_FLAGS 2.0 2014/11/20 09:55:20 16 16 $END $REMARKS -CLEAN functions: 2007/03/04 17:18:49 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2006-35\ctd\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2007/03/05 10:59:41 2007/03/05 10:59:41 2007/03/05 10:59: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2006-35\CTD\hydro\2006-35-0035.samavg Secondary file: Q:\Cruise_Data\2006-35\CTD\hydro\2006-35-0035.mrgcln1 -CLEAN functions: 2007/03/16 15:24:48 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2007/03/16 15:25:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2006-35\CTD\doc\2006-35-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.1420000E-01 0.1010700E+01 14 Salinity:T0:C0 PSS-78 10 -0.3500000E-02 0.1000000E+01 -SORT parameters: 2007/03/16 17:08:10 Sorted in ascending order of channel Pressure -REMOVECH 2007/03/16 17:09:08 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2007/03/16 17:26:25 Applied edit header: Q:\Cruise_Data\2006-35\CTD\doc\2006-35-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -The following MERGE parameters were used: 2007/03/17 15:44:21 2007/03/17 15:44:21 Merge Channel: Pressure Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: PAR Primary file : Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.che Secondary file: Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.par Comments from secondary file: Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.par ----------------------------------------------- -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -SORT parameters: 2007/03/17 15:40:41 Sorted in ascending order of channel Pressure $END *COMMENTS DO Sample # 130 Bubbles in flask but looks ok in COMPARE. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8400B Autosal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were stored "COOL" and analyzed within 1 week using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Average of two samples is reported. Variability is assessed as the % (std dev/mean*100). For this cruise the samples were kept frozen for several weeks. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: Q:\Cruise_Data\2006-35\CTD\par\2006-35-0035.par ----------------------------------------------- SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2006-35\2006-35-0035.dat Software Version Seasave Win32 V 5.29b Temperature SN = 2095 Conductivity SN = 2424 Number of Bytes Per Scan = 30 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Dec 02 2006 03:16:14 NMEA Latitude = 49 19.15 N NMEA Longitude = 123 48.01 W NMEA UTC (Time) = Dec 01 2006 03:16:10 Store Lat/Lon Data = Add to Header Only Ship: vector 2006-35 Cruise:2006-29 Station: 27 Latitude: Longitude: Depth: 343 # nquan = 5 # nvalues = 1903 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = par: PAR/Irradiance, Biospherical/Licor # name 3 = nbf: number of bottles fired # name 4 = flag: 0.000e+00 # interval = seconds: 0.0416667 # start_time = Dec 02 2006 03:16:14 # sensor 0 = Frequency 0 temperature, primary, 2095, 31-May-06 # sensor 1 = Frequency 1 conductivity, primary, 2424, 23-May-06, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 63507, 25-Oct-04 # sensor 3 = Frequency 3 temperature, secondary, 2668, 18-May-06 # sensor 4 = Frequency 4 conductivity, secondary, 2399, 23-May-06, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953, 21-Mar-06 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 1117, 17-Oct-06 # sensor 8 = Extrnl Volt 4 altimeter # sensor 9 = Extrnl Volt 6 irradiance (PAR), primary, 4656, 11-Feb-03 # datcnv_date = Mar 17 2007 15:28:03, 5.37e # datcnv_in = Q:\Cruise_Data\2006-35\CTD\2006-35-0035.dat Q:\Cruise_Data\2006-35 \CTD\2006-35-ctd.CON # datcnv_bottle_scan_range_source = BL file END* ************************************************************************************************** NOTE THAT THE CTD DATA IN THIS FILE SHOULD BE USED WITH CAUTION The CTD data in this file should be considered approximate. The bottles were fired from the deck unit rather than through the software, so no BL file was created. A BL file was fabricated based on recording scan numbers just before the CTD began moving up, combined with information from the rosette log sheet. This allowed preparation of this file, but the CTD data may not conincide exactly to the times of bottle firing. ************************************************************************************************** Salinity Sample #127 was an outlier in COMPARE. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.142E-01 1.0107) Salinity:T0:C0 PSS-78 10 -99 () (-0.35E-02 1) $END !1- --2--- ---3---- --4-- ---5--- --6--- --7-- ----8----- ---9---- -10- -11- ---12--- - --14-- - ---16-- - --18- - --20- - --22-- - !Bo Pressu Temperat Trans Fluores Oxygen Oxyge PAR Salinity Samp Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F !tt re ure: missi cence: : n: :T0:C0 le_ er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l !~u Primary vity URU: Dissol Disso Numb ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ !mb Seapoin ved: lved: er _rec l ted e e Nitri t t t !er t SBE SBE ords e d d te e e e !-- ------ -------- ----- ------- ------ ----- ---------- -------- ---- ---- -------- - ------ - ------- - ----- - ----- - ------ - *END OF HEADER 16 2.0 7.0804 49.5 0.424 6.53 285.6 2.112 27.3432 141 88 -99.0000 0 0.59 0 6.523 0 27.4 0 53.6 0 2.29 0 15 5.4 7.1753 50.0 0.423 6.51 284.7 0.366 27.4733 140 121 -99.0000 0 -99.00 0 6.501 0 27.7 0 53.6 0 2.31 0 14 10.4 7.3273 50.9 0.376 6.42 280.6 0.054 27.7112 139 121 -99.0000 0 -99.00 0 6.389 0 27.9 0 53.9 0 2.34 0 13 20.6 8.0044 52.5 0.246 6.08 265.8 0.000 28.2909 138 121 -99.0000 0 -99.00 0 6.152 0 28.2 0 54.3 0 2.42 0 12 30.4 8.1707 52.8 0.222 5.50 240.2 0.000 28.4880 137 121 -99.0000 0 -99.00 0 5.099 0 28.8 0 54.6 0 2.51 0 11 40.5 9.5966 55.6 0.091 3.73 162.8 0.000 30.0050 136 121 -99.0000 0 -99.00 0 3.720 0 30.1 0 55.7 0 2.65 0 10 50.4 9.7038 55.9 0.075 3.34 145.8 0.000 30.2844 135 121 -99.0000 0 -99.00 0 3.289 0 30.2 6 56.0 6 2.66 6 9 75.2 10.0321 56.0 0.052 2.75 120.1 0.000 30.7514 134 121 -99.0000 0 -99.00 0 2.755 0 29.7 0 53.2 0 2.58 0 8 100.4 9.8972 55.3 0.051 3.37 146.9 0.000 30.8947 133 121 -99.0000 0 -99.00 0 3.388 0 28.8 0 49.6 0 2.46 0 7 125.3 9.8834 55.1 0.052 3.31 144.3 0.000 30.9823 132 121 -99.0000 0 -99.00 0 3.334 0 28.7 0 49.6 0 2.46 0 6 150.4 10.0144 54.6 0.047 2.92 127.3 0.000 31.1225 131 121 -99.0000 0 -99.00 0 2.961 0 28.6 0 51.0 0 2.49 0 5 175.2 9.7818 51.7 0.052 3.28 143.1 0.000 31.1481 130 121 -99.0000 0 -99.00 0 3.332 0 29.1 0 51.2 0 2.50 0 4 200.6 9.7561 50.8 0.052 3.18 138.9 0.000 31.2037 129 121 -99.0000 0 -99.00 0 3.208 0 29.0 0 51.6 0 2.52 0 3 250.6 9.8846 52.8 0.048 2.83 123.2 0.000 31.3173 128 121 -99.0000 0 -99.00 0 2.845 0 29.0 0 52.8 0 2.54 0 2 300.6 9.8980 52.8 0.047 2.74 119.5 0.000 31.3549 127 121 31.4234 3 -99.00 0 2.753 0 29.0 0 54.2 0 2.56 0 1 336.7 9.8752 50.5 0.048 2.59 112.8 0.000 31.4292 126 121 -99.0000 0 -99.00 0 2.634 0 29.1 0 57.4 0 2.65 0