*2014/11/20 09:55:20.31 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2006/11/30 11:17:28.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 14 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : F9983A7C NUMBER OF CHANNELS : 21 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 14 2 Pressure decibar 1.8 216.5 3 Temperature:Primary 'deg C (ITS90)' 8.6793 9.0256 4 Transmissivity %/metre 41 48 5 Fluorescence:URU:Seapoint mg/m^3 0.149 0.204 6 Oxygen:Dissolved:SBE mL/L 4.972456 5.246529 7 Oxygen:Dissolved:SBE umol/kg 216.9087 229.1441 8 PAR uE/m^2/sec 0 1.9 9 Salinity:T0:C0 PSS-78 29.0679 30.561 10 Sample_Number n/a 67 80 11 Number_of_bin_records n/a 121 121 12 Salinity:Bottle PSS-78 30.5499 30.5499 13 Flag:Salinity:Bottle n/a 14 Oxygen:Dissolved mL/L 5.047 5.386 15 Flag:Oxygen:Dissolved n/a 16 Nitrate_plus_Nitrite umol/L 28.4 29.4 17 Flag:Nitrate_plus_Nitrite n/a 18 Silicate umol/L 50.8 55.5 19 Flag:Silicate n/a 20 Phosphate umol/L 2.39 2.48 21 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 5 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 8 F ' ' 3 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2006-35 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : SoG-JdeF SCIENTIST : Masson D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 56 EVENT NUMBER : 19 LATITUDE : 48 46.32000 N ! (deg min) LONGITUDE : 123 1.63000 W ! (deg min) WATER DEPTH : 216 ALTIMETER (M) : 8.06 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 2424 pressure ' ' 63507 temperature:secondary ' ' 2668 conductivity:secondary ' ' 2399 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953 Oxygen:SBE ' ' 1117 altimeter: ' ' ' ' irradiance:primary ' ' 4656 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.29B $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2007/03/04 15:21:33 1694 1694 CLEAN 5.0 2007/03/04 15:24:32 ? ? ADDSAMP 3.4 2007/03/04 17:31:03 1694 1694 BINAVE 4.1.1 2007/03/05 10:59:16 1694 14 MERGE 3.3 2007/03/05 10:59:41 14 14 CLEAN 5.0 2007/03/16 15:24:49 ? ? CALIB 11.7 2007/03/16 15:25:21 14 14 SORT 3.5 2007/03/16 17:08:09 14 14 REMOVECH 7.0 2007/03/16 17:09:07 14 14 CHGUNITS 3.0 2007/03/16 17:09:48 14 14 REORDER 1.2.1 2007/03/16 17:10:00 ? ? HDREDIT2 2.5.1 2007/03/16 17:26:25 ? ? CALIB 11.7 2007/03/23 15:16:52 14 14 CHANGE_FLAGS 1.0 2013/07/16 11:48:29 14 14 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:32:44 14 14 CHANGE_FLAGS 2.0 2014/11/20 09:55:20 14 14 $END $REMARKS -CLEAN functions: 2007/03/04 15:24:24 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2006-35\ctd\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2007/03/05 10:59:41 2007/03/05 10:59:41 2007/03/05 10:59: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2006-35\CTD\hydro\2006-35-0019.samavg Secondary file: Q:\Cruise_Data\2006-35\CTD\hydro\2006-35-0019.mrgcln1 -CLEAN functions: 2007/03/16 15:24:48 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2007/03/16 15:25:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2006-35\CTD\doc\2006-35-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.1420000E-01 0.1010700E+01 15 Salinity:T0:C0 PSS-78 10 -0.3500000E-02 0.1000000E+01 -SORT parameters: 2007/03/16 17:08:09 Sorted in ascending order of channel Pressure -REMOVECH 2007/03/16 17:09:07 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2007/03/16 17:26:25 Applied edit header: Q:\Cruise_Data\2006-35\CTD\doc\2006-35-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 8: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 -CALIB parameters: 2007/03/23 15:16:52 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2006-35\CTD\hydro\2006-35-corr.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Oxygen:Dissolved:SBE [mL/L] mL/L 10 0.0000000E+00 0.9788300E+00 7 Oxygen:Dissolved:SBE [umol/kg umol/kg 10 0.0000000E+00 0.9788300E+00 $END *COMMENTS Sample #l8: Salinity sample stands out as outlier in COMPARE. Short stop with corruption by shed wake. CTD data looks ok, but bottle might be affected. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8400B Autosal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were stored "COOL" and analyzed within 1 week using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Average of two samples is reported. Variability is assessed as the % (std dev/mean*100). For this cruise the samples were kept frozen for several weeks. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !-------------------------------- --------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.142E-01 1.0107) Salinity:T0:C0 PSS-78 10 -99 () (-0.35E-02 1) 'Oxygen:Dissolved:SBE [mL/L]' mL/L 10 -99 () (0 0.97883) 'Oxygen:Dissolved:SBE [umol/kg]' umol/kg 10 -99 () (0 0.97883) $END !1- --2--- ---3---- --4-- ---5--- --6--- --7-- --8--- ---9---- -10- -11- ---12--- - ---14-- - --16- - --18- - --20-- - !Bo Pressu Temperat Trans Fluores Oxygen Oxyge PAR Salinity Samp Numb Salinity F Oxygen: F Nitra F Silic F Phosph F !tt re ure: missi cence: : n: :T0:C0 le_ er_o :Bottle l Dissolv l te_ l ate l ate l !~u Primary vity URU: Dissol Disso Numb ~bin ~ ed ~ plus_ ~ ~ ~ !mb Seapoin ved: lved: er _rec l e Nitri t t t !er t SBE SBE ords e d te e e e !-- ------ -------- ----- ------- ------ ----- ------ -------- ---- ---- -------- - ------- - ----- - ----- - ------ - *END OF HEADER 14 1.8 8.6793 47.7 0.204 5.25 229.1 1.9 29.0679 80 121 -99.0000 0 5.386 0 29.0 0 55.5 0 2.46 0 13 5.8 8.7159 47.6 0.188 5.22 228.0 0.2 29.1135 79 121 -99.0000 0 5.323 0 29.1 0 55.2 0 2.47 0 12 10.9 8.7162 47.5 0.186 5.22 227.6 0.0 29.1271 78 121 -99.0000 0 5.321 0 29.2 0 55.1 0 2.46 0 11 20.1 8.9231 48.0 0.172 5.05 220.5 0.0 29.4210 77 121 -99.0000 0 5.156 0 29.4 0 54.9 0 2.48 0 10 29.8 8.8546 44.9 0.173 5.03 219.6 0.0 29.7379 76 121 -99.0000 0 5.298 0 29.0 0 53.5 0 2.47 0 9 40.3 8.9076 44.5 0.166 4.99 217.8 0.0 30.1040 75 121 -99.0000 0 5.080 0 29.1 0 53.0 0 2.45 0 8 50.3 8.9428 44.5 0.159 4.97 216.9 0.0 30.2008 74 121 -99.0000 0 5.047 0 29.2 0 52.7 0 2.45 0 7 74.9 8.9618 44.1 0.152 5.00 218.0 0.0 30.3286 73 121 -99.0000 0 5.195 0 28.9 6 52.4 6 2.42 6 6 100.1 8.9470 44.2 0.151 5.03 219.6 0.0 30.3669 72 121 -99.0000 0 5.118 0 28.9 0 52.2 0 2.42 0 5 125.2 8.9534 44.0 0.153 5.05 220.3 0.0 30.4132 71 121 -99.0000 0 5.132 0 28.9 0 51.9 0 2.42 0 4 150.3 8.9863 43.2 0.149 5.04 219.6 0.0 30.4752 70 121 -99.0000 0 5.112 0 28.6 0 51.9 0 2.40 0 3 175.2 8.9991 42.7 0.180 5.03 219.6 0.0 30.5009 69 121 -99.0000 0 5.128 0 28.6 0 51.3 0 2.41 0 2 200.3 9.0068 42.3 0.152 5.05 220.0 0.0 30.5194 68 121 30.5499 3 5.131 0 28.5 0 51.3 0 2.39 0 1 216.5 9.0256 41.0 0.156 5.05 220.1 0.0 30.5610 67 121 -99.0000 0 5.211 0 28.4 0 50.8 0 2.39 0