*2014/11/20 09:55:07.62 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2006/07/14 20:20:10.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 11 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 26C7C1AF NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 11 2 Pressure decibar 6.247 216.891 3 Temperature:Secondary 'deg C (ITS90)' 9.1016 12.2324 4 Transmissivity %/metre 35.2 57 5 Fluorescence:URU:Seapoint mg/m^3 0.113 0.869 6 Salinity:T1:C1 PSS-78 28.9925 31.3429 7 Sample_Number n/a 1 11 8 Number_of_bin_records n/a 121 121 9 Salinity:Bottle PSS-78 28.8088 31.3414 10 Flag:Salinity:Bottle n/a 11 Chlorophyll:Extracted mg/m^3 0.9E-01 1.59 12 Flag:Chlorophyll:Extracted n/a 13 Oxygen:Dissolved mL/L 0 4.882 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 16.7 28.6 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 42.6 126.8 18 Flag:Silicate n/a 19 Phosphate umol/L 1.62 6.52 20 Flag:Phosphate n/a 21 Ammonium umol/L 0 10.21 22 Flag:Ammonium n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 5 I I 0 8 ' ' ' ' 5 I I 0 9 -99 ' ' 9 F R4 4 10 0 ' ' 2 NQ C ' ' 11 -99 ' ' 7 F R4 2 12 0 ' ' 2 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 0 ' ' 2 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 0 ' ' 2 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 2 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 2 NQ C ' ' 21 -99 ' ' ' ' F7.2 R4 ' ' 22 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2006-13 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : NE Pacific STATION : SI03 EVENT NUMBER : 1 LATITUDE : 48 35.55000 N ! (deg min) LONGITUDE : 123 29.97000 W ! (deg min) WATER DEPTH : 224 ALTIMETER (M) : 8.6 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2668 conductivity:primary ' ' 2399 pressure ' ' 75636 temperature:secondary ' ' 2038 conductivity:secondary ' ' 2754 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.29B $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2006/11/14 10:54:47 2858 2858 ADDSAMP 3.4 2006/11/14 13:09:21 2858 2858 BINAVE 4.1.1 2006/11/14 13:09:48 2858 24 MERGE 3.3 2006/11/14 13:46:38 11 11 CLEAN 5.0 2006/11/14 16:06:50 ? ? CALIB 11.7 2006/11/15 15:32:34 11 11 SORT 3.5 2006/11/20 11:13:47 11 11 REMOVECH 7.0 2006/11/20 11:17:57 11 11 HDREDIT2 2.5.1 2006/11/20 11:24:35 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:48:21 11 11 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:32:31 11 11 CHANGE_FLAGS 2.0 2014/11/20 09:55:07 11 11 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2006-13\ctd\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2006/11/14 13:46:38 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium Primary file : Q:\Cruise_Data\2006-13\CTD\hydro\2006-13-0001.samavg Secondary file: Q:\Cruise_Data\2006-13\CTD\hydro\2006-13-0001.mrgcln1 -CLEAN functions: 2006/11/14 16:06:50 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2006/11/15 15:32:34 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2006-13\CTD\doc\2006-13-recal1-bot.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.1200000E+01 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 0.4530000E-01 0.1023000E+01 16 Salinity:T1:C1 PSS-78 10 -0.1300000E-02 0.1000000E+01 -SORT parameters: 2006/11/20 11:13:47 Sorted in ascending order of channel Pressure -REMOVECH 2006/11/20 11:17:57 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Oxygen:Dissolved:SBE [mL/L] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -HEADER EDITS: 2006/11/20 11:24:35 Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_analysis.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint $END *COMMENTS Sample_Number 1: H2S - no NO3 analyzed Sample_Number 2: H2S - no NO3 analyzed Sample_Number 3: H2S - no NO3 analyzed Sample_Number 4: H2S - no NO3 analyzed Sample_Number 5: H2S - no NO3 analyzed Sample_Number 7: Niskin misfire likely; all chemistry values look out of line The dissolved oxygen sensor was not mounted on the CTD for this cast. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Pressure dbars 10 -99 () (1.2 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.453E-01 1.023) Salinity:T1:C1 PSS-78 10 -99 () (-0.13E-02 1) $END !1- --2--- ---3---- --4-- ---5--- ---6---- -7-- -8-- ---9---- - --11-- - ---13-- - --15- - --17- - --19-- - --21-- - !Bo Pressu Temperat Trans Fluores Salinity Samp Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F Ammoni F !tt re ure: missi cence: :T1:C1 le_ er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l um l !~u Secondar vity URU: Numb ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ ~ !mb y Seapoin er _rec l ted e e Nitri t t t u !er t ords e d d te e e e m !-- ------ -------- ----- ------- -------- ---- ---- -------- - ------ - ------- - ----- - ----- - ------ - ------ - *END OF HEADER 11 6.2 12.2324 44.8 0.869 28.9925 11 121 29.0157 0 1.59 0 4.882 0 16.7 0 64.9 0 1.62 0 0.15 0 10 11.2 11.6978 50.8 0.447 29.1705 10 121 29.2020 0 0.56 0 4.470 0 18.9 0 64.9 0 1.77 0 0.00 0 9 26.3 10.3017 55.0 0.271 29.4258 9 121 29.4406 0 0.35 0 4.255 0 19.3 0 42.6 0 2.03 0 2.15 0 8 51.3 9.2732 54.1 0.160 29.9819 8 121 29.9936 0 0.14 0 3.340 0 28.6 0 85.7 0 2.58 0 0.01 0 7 76.1 9.1016 48.9 0.125 30.7281 7 121 28.8088 5 -99.00 5 -99.000 5 -99.0 5 -99.0 5 -99.00 5 -99.00 5 6 101.4 9.3860 37.9 0.123 30.9939 6 121 31.0037 0 0.09 0 1.492 0 22.2 0 124.0 0 3.54 0 0.02 0 5 126.5 9.5882 47.7 0.113 31.2112 5 121 31.2297 0 -99.00 0 -99.000 0 -99.0 9 113.4 0 5.39 0 3.07 0 4 151.3 9.6616 35.2 0.115 31.2929 4 121 31.2948 0 -99.00 0 -99.000 0 -99.0 9 122.9 0 5.77 0 6.73 0 3 176.0 9.6988 56.8 0.116 31.3233 3 121 31.3240 0 -99.00 0 -99.000 0 -99.0 9 126.8 0 6.00 0 7.67 0 2 201.3 9.7116 57.0 0.116 31.3354 2 121 31.3386 0 -99.00 0 0.000 0 -99.0 9 118.7 0 6.32 0 9.07 0 1 216.9 9.7127 56.2 0.121 31.3429 1 121 31.3414 0 -99.00 0 0.000 0 -99.0 9 123.7 0 6.52 0 10.21 0