*2014/11/20 09:55:05.77 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2006/04/15 02:47:17.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 8 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 1723FFA1 NUMBER OF CHANNELS : 24 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 1 8 2 Pressure decibar 1.252 76.733 3 Temperature:Primary 'deg C (ITS90)' 8.0444 9.6451 4 Transmissivity %/metre 22 53.5 5 Fluorescence:URU:Seapoint mg/m^3 0.354 14.85 6 Oxygen:Dissolved:SBE mL/L 5.229 8.96 7 Oxygen:Dissolved:SBE umol/kg 228.1096 391.3814 8 PAR uE/m^2/sec 0.511 20.71 9 PAR:Reference uE/m^2/sec 43.603 77.854 10 Salinity:T0:C0 PSS-78 28.6074 30.029 11 Bottle_Number n/a 1 8 12 Number_of_bin_records n/a 92 121 13 Salinity:Bottle PSS-78 30.0274 30.0274 14 Flag:Salinity:Bottle n/a 15 Chlorophyll:Extracted mg/m^3 3.28 20.8 16 Flag:Chlorophyll:Extracted n/a 17 Oxygen:Dissolved mL/L 5.284 9.042 18 Flag:Oxygen:Dissolved n/a 19 Nitrate_plus_Nitrite umol/L 1.2 27.7 20 Flag:Nitrate_plus_Nitrite n/a 21 Silicate umol/L 4.8 53.5 22 Flag:Silicate n/a 23 Phosphate umol/L 0.41 2.4 24 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I ' ' 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 7 F ' ' 1 10 -99 ' ' 9 F ' ' 4 11 -99 ' ' 3 I I ' ' 12 ' ' ' ' 5 I I 0 13 -99 ' ' ' ' F9.4 R4 ' ' 14 0 ' ' 2 NQ C ' ' 15 -99 ' ' ' ' F7.2 R4 ' ' 16 0 ' ' 2 NQ C ' ' 17 -99 ' ' 8 F ' ' 3 18 0 ' ' 2 NQ C ' ' 19 -99 ' ' ' ' F6.1 R4 ' ' 20 0 ' ' 2 NQ C ' ' 21 -99 ' ' ' ' F6.1 R4 ' ' 22 0 ' ' 2 NQ C ' ' 23 -99 ' ' ' ' F7.2 R4 ' ' 24 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2006-11 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : SoG/JdeF SCIENTIST : Pena A. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia/Juan de Fuca Strait STATION : SI EVENT NUMBER : 2 LATITUDE : 48 38.75000 N ! (deg min) LONGITUDE : 123 29.77000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2968 conductivity:primary ' ' 1766 pressure ' ' 63507 temperature:secondary ' ' 2106 conductivity:secondary ' ' 1729 Fluorometer ' ' Seapoint transmissometer:primary ' ' 723DR Oxygen:SBE ' ' 0766 altimeter: ' ' ' ' irradiance:primary ' ' 4565 surface ' ' 'degrees = 0.0' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.37D Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2006/06/12 13:40:17 1846 1846 ADDSAMP 3.4 2006/06/14 17:21:01 1846 1846 BINAVE 4.1 2006/06/14 17:32:34 1846 24 MERGE 3.3 2006/07/12 16:10:40 24 8 CLEAN 5.0 2006/07/12 16:11:25 8 8 CALIB 11.7 2006/07/12 16:13:41 8 8 SORT 3.5 2006/07/12 16:22:00 8 8 REMOVECH 7.0 2006/07/12 16:22:10 8 8 CHGUNITS 3.0 2006/07/12 16:22:17 8 8 REORDER 1.2.1 2006/07/12 16:22:23 ? ? HDREDIT2 2.5.1 2006/07/12 16:25:13 ? ? HDREDIT2 2.5.1 2006/12/12 18:03:14 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:30:16 8 8 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:32:29 8 8 CHANGE_FLAGS 2.0 2014/11/20 09:55:05 8 8 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2006-11\CTD\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2006/07/12 16:10:40 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.samavg Secondary file: Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.mrg4 -The following MERGE parameters were used: 2006/07/12 16:05:46 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle [PSS-78], Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.cst Secondary file: Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.sal -The following MERGE parameters were used: 2006/07/12 16:07:03 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.mrg1 Secondary file: Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.chl -The following MERGE parameters were used: 2006/07/12 16:07:18 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.mrg2 Secondary file: Q:\Cruise_Data\2006-11\CTD\hydro\2006-11-0002.add C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following MERGE parameters were used: 2006/07/12 16:08:50 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2006-11\ctd\hydro\2006-11-0002.mrg3 Secondary file: Q:\Cruise_Data\2006-11\ctd\hydro\2006-11-0002.nuts -CLEAN functions: 2006/07/12 16:11:25 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2006/07/12 16:13:41 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2006-11\CTD\doc\2006-11-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 0.7830000E-01 0.1066300E+01 -SORT parameters: 2006/07/12 16:22:00 Sorted in ascending order of channel Pressure -REMOVECH 2006/07/12 16:22:10 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Altimeter [metres] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2006/07/12 16:25:13 Applied edit header: Q:\Cruise_Data\2006-11\CTD\doc\2006-11-BOT-HDR.TXT Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 8: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 -HEADER EDITS: 2006/12/12 18:03:14 Applied edit header: Q:\Cruise_Data\Bottle Header Fix\fix-hdr-qual.txt $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on a Guildline Autosal 8400B Salinometer which was standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Average of two samples is reported unless stated otherwise. Variability is assessed as the % (std dev/mean*100). References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. ------------------------------------------------------------------------------ *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.783E-01 1.0663) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- --8--- --9--- ---10--- 11 -12- ---13--- - --15-- - ---17-- - --19- - --21- - --23-- - !Samp Pressu Temperat Trans Fluores Oxygen Oxyge PAR PAR: Salinity Bo Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F !le_ re ure: missi cence: : n: Refere :T0:C0 tt er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l !Numb Primary vity URU: Dissol Disso nce ~u ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ !er Seapoin ved: lved: mb _rec l ted e e Nitri t t t ! t SBE SBE er ords e d d te e e e !---- ------ -------- ----- ------- ------ ----- ------ ------ -------- -- ---- -------- - ------ - ------- - ----- - ----- - ------ - *END OF HEADER 8 1.3 9.6451 41.9 4.567 8.96 391.4 20.7 43.6 28.6074 8 92 -99.0000 0 -99.00 0 9.042 0 1.2 0 4.8 0 0.41 0 7 5.2 9.3880 35.4 9.043 8.86 386.9 6.1 47.8 28.8759 7 121 -99.0000 0 3.28 0 8.993 0 2.8 0 8.2 0 0.57 0 6 10.2 8.7927 22.0 14.850 8.49 370.9 1.6 51.9 29.1919 6 121 -99.0000 0 20.80 0 7.727 0 13.6 0 23.7 0 1.48 0 5 20.1 8.3200 52.4 1.598 5.86 255.6 0.5 56.1 29.4647 5 121 -99.0000 0 -99.00 0 5.889 0 23.8 0 45.3 0 2.06 0 4 30.1 8.2977 48.2 1.873 5.81 253.5 0.5 60.2 29.5063 4 121 -99.0000 0 -99.00 0 5.731 0 24.7 0 49.2 0 2.22 0 3 40.3 8.1665 52.5 0.991 5.56 242.7 0.5 66.2 29.5408 3 121 -99.0000 0 -99.00 0 5.438 0 26.9 0 53.1 0 2.29 0 2 52.5 8.0444 53.5 0.603 5.30 231.3 0.5 70.6 29.6122 2 121 -99.0000 0 -99.00 0 5.284 0 27.7 0 53.5 0 2.40 0 1 76.7 8.1146 49.8 0.354 5.23 228.1 0.5 77.9 30.0290 1 121 30.0274 0 -99.00 0 5.346 0 27.1 0 52.0 0 2.35 0