*2018/07/06 08:59:48.36 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2004/09/16 08:42:21.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 15 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 105 119 2 Pressure decibar 2.196 268.813 3 Temperature:Primary 'deg C (ITS90)' 9.4676 15.1968 4 Transmissivity %/metre 45.8 57.3 5 Fluorescence:URU:Seapoint mg/m^3 0.177 1.9 6 PAR uE/m^2/sec 0.503 1.576 7 PAR:Reference uE/m^2/sec 2.076 2.076 8 Salinity:T0:C0 PSS-78 25.4423 31.0226 9 Bottle_Number n/a 1 15 10 Number_of_bin_records n/a 121 121 11 Salinity:Bottle PSS-78 25.4605 31.0157 12 Flag:Salinity:Bottle n/a 13 Chlorophyll:Extracted mg/m^3 0.9E-01 1.14 14 Flag:Chlorophyll:Extracted n/a 15 Oxygen:Dissolved mL/L 2.785 6.107 16 Flag:Oxygen:Dissolved n/a 17 Nitrate umol/L 3.9 29.5 18 Flag:Nitrate n/a 19 Silicate umol/L 19.3 63.1 20 Flag:Silicate n/a 21 Phosphate umol/L 0.57 2.81 22 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 -99 ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 -99 ' ' 2 NQ C ' ' 13 -99 ' ' 7 F R4 2 14 -99 ' ' 2 NQ C ' ' 15 -99 ' ' 8 F ' ' 3 16 -99 ' ' 2 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 -99 ' ' 2 NQ C ' ' 19 -99 ' ' 6 F R4 1 20 -99 ' ' 2 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 -99 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-26 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : JdeF/SoG SCIENTIST : Masson D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / Strait of Georgia STATION : 2 EVENT NUMBER : 29 LATITUDE : 49 24.14000 N ! (deg min) LONGITUDE : 124 9.23000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2106 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2449 conductivity:secondary ' ' 1766 Fluorometer ' ' Seapoint transmissometer:primary ' ' 723DR irradiance:primary ' ' 4656 surface ' ' 'degrees = 0.0' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.32 Comments from secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.add ------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.9 2005/02/07 14:43:00 1815 1815 CLEAN 4.7.1 2005/02/07 14:43:38 ? ? ADDSAMP 3.4 2005/02/08 15:51:37 1815 1815 BINAVE 4.0.1 2005/02/08 15:54:09 1815 15 MERGE 3.3 2005/02/08 15:54:30 15 15 MERGE 3.3 2005/02/08 15:54:39 15 15 MERGE 3.3 2005/02/08 15:54:47 15 15 MERGE 3.3 2005/02/12 14:17:07 15 15 CLEAN 4.7.1 2005/02/12 14:20:10 ? ? SORT 3.5 2005/02/12 14:20:25 15 15 REMOVECH 7.0 2005/02/12 14:20:33 15 15 HDREDIT2 2.4 2005/02/12 14:25:31 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:47:52 15 15 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:31:36 15 15 CHANGE_FLAGS 2.0 2014/11/20 09:54:32 15 15 CLEAN 5.2.3 2018/07/06 08:59:48 ? ? $END $REMARKS -CLEAN functions: 2005/02/07 14:43:25 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-26\CTD\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2005/02/08 15:54:29 2005/02/08 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.samavg Secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.sal -The following MERGE parameters were used: 2005/02/08 15:54:39 2005/02/08 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.mrg1 Secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.chl -The following MERGE parameters were used: 2005/02/08 15:54:46 2005/02/08 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.mrg2 Secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.add Comments from secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.add ------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following MERGE parameters were used: 2005/02/12 14:17:06 2005/02/12 14:17: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate, Flag:Nitrate, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2004-26\ctd\hydro\2004-26-0029.mrg3 Secondary file: Q:\Cruise_Data\2004-26\ctd\hydro\2004-26-0029.nut1 Comments from secondary file: Q:\Cruise_Data\2004-26\ctd\hydro\2004-26-0029.nut1 -------------------------------------------------- -SORT parameters: 2005/02/12 14:16:47 Sorted in ascending order of channel Sample_Number -CLEAN functions: 2005/02/12 14:20:09 20 Remove Sea-Bird comments from the header. -SORT parameters: 2005/02/12 14:20:25 Sorted in ascending order of channel Pressure -REMOVECH 2005/02/12 14:20:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2005/02/12 14:25:31 Applied edit header: Q:\Cruise_Data\2004-26\CTD\doc\2004-26-bottle-header.txt Channel 2: Pressure [dbars] Units: decibar ==> dbars Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 13: Chlorophyll:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 14: Flag:Chlorophyll:Extracted [] Pad: 0 ==> blank Channel 16: Flag:Oxygen:Dissolved [] Pad: 0 ==> blank Channel 18: Flag:Nitrate [] Pad: 0 ==> blank Channel 20: Flag:Silicate [] Pad: 0 ==> blank Channel 22: Flag:Phosphate [] Pad: 0 ==> blank Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Pad: 0 ==> blank -CLEAN functions: 2018/07/06 08:59:48 20 Change Pad Value to -99 in All Channels. $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-26\CTD\hydro\2004-26-0029.add ------------------------------------------------- Sample_Number 116: Bubble in probe. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. All Chlorophyll:Extracted data is the average of two samples unless otherwis noted. Variability is assessed as the % (std dev/mean*100). References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. !-1-- --2--- ---3---- --4-- ---5--- --6--- --7--- ---8---- 9- -10- ---11--- - --13-- - ---15-- - --17- - --19- - --21-- - !Samp Pressu Temperat Trans Fluores PAR PAR: Salinity Bo Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F !le_ re ure: missi cence: Refere :T0:C0 tt er_o :Bottle l phyll: l Dissolv l te l ate l ate l !Numb Primary vity URU: nce ~u ~bin ~ Extrac ~ ed ~ ~ ~ ~ !er Seapoin mb _rec l ted e e t t t ! t er ords e d d e e e !---- ------ -------- ----- ------- ------ ------ -------- -- ---- -------- - ------ - ------- - ----- - ----- - ------ - *END OF HEADER 119 2.2 15.1968 46.7 1.535 1.6 2.1 25.4423 15 121 25.4605 0 1.03 0 6.107 0 3.9 0 19.3 0 0.57 0 118 6.4 15.1108 46.5 1.735 0.7 2.1 26.1209 14 121 -99.0000 0 1.14 0 5.859 0 5.0 0 20.7 0 0.69 0 117 11.0 14.6070 45.8 1.900 0.5 2.1 26.4143 13 121 -99.0000 0 1.13 0 5.688 0 7.3 0 23.2 0 0.87 0 116 21.5 12.1376 55.7 0.552 0.5 2.1 28.6528 12 121 -99.0000 0 0.37 0 4.262 3 19.8 0 40.2 0 1.78 0 115 32.2 10.6230 57.3 0.327 0.5 2.1 29.1834 11 121 -99.0000 0 0.20 0 3.736 0 22.7 0 43.5 0 2.24 0 114 42.1 10.4232 57.1 0.241 0.5 2.1 29.5635 10 121 -99.0000 0 0.09 0 3.522 0 27.6 0 51.1 0 2.36 0 113 52.2 9.9375 56.2 0.199 0.5 2.1 29.8329 9 121 -99.0000 0 -99.00 0 3.361 0 29.5 0 52.3 0 2.56 0 112 78.0 9.9196 54.0 0.183 0.5 2.1 30.3587 8 121 -99.0000 0 -99.00 0 3.154 0 29.2 0 49.4 0 2.51 0 111 103.0 10.1202 51.4 0.183 0.5 2.1 30.6589 7 121 -99.0000 0 -99.00 0 3.123 0 28.1 0 48.5 0 2.46 0 110 127.3 9.7364 52.1 0.181 0.5 2.1 30.6855 6 121 -99.0000 0 -99.00 0 3.074 0 29.3 0 53.8 0 2.58 0 109 150.5 9.5682 51.7 0.179 0.5 2.1 30.7711 5 121 -99.0000 0 -99.00 0 2.987 0 29.1 0 57.9 0 2.66 0 108 179.6 9.5759 52.5 0.177 0.5 2.1 30.8694 4 121 -99.0000 0 -99.00 0 2.974 0 29.0 0 59.3 0 2.71 0 107 200.8 9.4676 52.7 0.177 0.5 2.1 30.9190 3 121 -99.0000 0 -99.00 0 2.845 0 27.1 0 57.5 0 2.81 0 106 252.6 9.5072 51.2 0.177 0.5 2.1 30.9852 2 121 30.9764 0 -99.00 0 2.785 0 24.4 0 50.0 0 2.77 0 105 268.8 9.5610 49.5 0.178 0.5 2.1 31.0226 1 121 31.0157 0 -99.00 0 2.837 0 28.6 0 63.1 0 2.81 0