*2014/11/20 09:54:30.19 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/08/18 14:39:32.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 21 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 260 280 2 Pressure decibar 1.9 141.7 3 Temperature:Secondary 'deg C (ITS90)' 6.7741 15.5671 4 Transmissivity %/metre 18.5 59.4 5 Fluorescence:URU:Seapoint mg/m^3 0.72E-01 4.185 6 PAR uE/m^2/sec 0.5 264.5 7 Oxygen:Dissolved:SBE mL/L 1.73 7.03 8 Salinity:T1:C1 PSS-78 31.8567 33.9145 9 Bottle_Number n/a 1 21 10 Number_of_bin_records n/a 53 121 11 Salinity:Bottle PSS-78 31.8726 33.921 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 1.759 7.05 14 Nitrate_plus_Nitrite umol/L 0.3 34.5 15 Flag:Nitrate_plus_Nitrite n/a 16 Silicate umol/L 14.8 60.9 17 Flag:Silicate n/a 18 Phosphate umol/L 0.38 2.65 19 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 2 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 -99 ' ' ' ' F6.1 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F6.1 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' ' ' F7.2 R4 ' ' 19 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-24 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Central Coast B.C. BioChemical Study SCIENTIST : Ianson D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : G4 EVENT NUMBER : 41 LATITUDE : 49 10.97000 N ! (deg min) LONGITUDE : 126 50.05000 W ! (deg min) WATER DEPTH : 149 ALTIMETER (M) : 7.33 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 75636 temperature:secondary ' ' 2710 conductivity:secondary ' ' 2128 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR Oxygen:SBE ' ' 0043 altimeter: ' ' ' ' irradiance:primary ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.31A Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.add ---------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.9 2004/12/09 16:15:56 1979 1979 CLEAN 4.7.1 2004/12/09 16:16:50 ? ? ADDSAMP 3.4 2004/12/09 16:17:46 1979 1979 BINAVE 4.0.1 2004/12/09 16:18:31 1979 21 MERGE 3.3 2004/12/09 16:19:54 21 21 MERGE 3.3 2004/12/09 16:39:09 21 21 MERGE 3.3 2004/12/09 16:39:21 21 21 CALIB 11.4 2004/12/09 17:19:27 21 21 CLEAN 4.7.1 2004/12/09 17:27:31 21 21 SORT 3.5 2004/12/09 17:27:59 21 21 REMOVECH 6.0 2004/12/09 17:30:18 21 21 HDREDIT2 2.3 2004/12/09 17:33:26 ? ? CALIB 11.4 2004/12/10 12:01:36 21 21 SORT 3.5 2004/12/15 11:45:32 21 21 MERGE 3.3 2004/12/15 11:46:46 21 21 SORT 3.5 2004/12/15 11:58:18 21 21 CHANGE_FLAGS 1.0 2013/07/16 11:47:51 21 21 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:31:23 21 21 CHANGE_FLAGS 2.0 2014/11/20 09:54:30 21 21 $END $REMARKS -CLEAN functions: 2004/12/09 16:16:12 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-24\CTD\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2004/12/09 16:19:52 2004/12/09 16:19: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.samavg Secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.sal Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.sal ---------------------------------------------------- -HEADER EDITS: 2004/11/22 14:07:13 Applied edit header: Q:\Cruise_Data\2004-24\CTD\doc\2004-24-Salinity.HDR -The following MERGE parameters were used: 2004/12/09 16:39:07 2004/12/09 16:39: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.mrg1 Secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.add Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.add ---------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following OXYCALC parameters were used Blank = 0.002 Sodium Thiosulfate concentration = 0.714 Volume of iodate standard (cm**3) = 9.98 Enter Normalitity of iodate standard = 0.01014000 -The following CHANNEL(S) were removed from file. Oxygen:Dissolved -HEADER EDITS: 2004/12/06 15:25:53 Channel 8: Oxygen:Dissolved [mL/L] Name ==> Oxygen:Dissolved Format: F7.3 ==> F8.3 Pad: ' ' ==> -99 Channel 9: Flag:Dissolved_oxygen [] Name ==> Flag:Dissolved_oxygen -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0041.mrg2 Secondary file: Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0041.nuts -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-24\ctd\doc\2004-24-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Oxygen:Dissolved:SBE mL/L 10 -0.3090000E-01 0.1078500E+01 17 Salinity:T1:C1 PSS-78 10 -0.1180000E-01 0.1000000E+01 -CLEAN functions: 2004/12/09 17:27:30 20 Change Pad Value to -99 in Channel: Oxygen:Dissolved [mL/L] Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel Pressure [decibar] is in the range 1000 to 10000 17 data records in pad range. Remove Sea-Bird comments from the header. -SORT parameters: 2004/12/09 17:27:59 Sorted in ascending order of channel Pressure -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Primary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Altimeter Descent_Rate Status:Pump Salinity:T0:C0 Flag -HEADER EDITS: 2004/12/09 17:33:26 Applied edit header: Q:\Cruise_Data\2004-24\CTD\doc\bottle_hdr.txt Channel 2: Pressure [dbars] Units ==> dbars Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name ==> Fluorescence:URU:Seapoint Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-24\ctd\doc\2004-24-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T1:C1 PSS-78 10 0.7000000E-03 0.1000000E+01 -SORT parameters: 2004/12/15 11:45:32 Sorted in descending order of channel Sample_Number [n/a] -The following MERGE parameters were used: 2004/12/15 11:46:46 2004/12/15 11:46: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : H:\Cruise_Data\2004-24\CTD\hydro\Updated Nutrient File\2004-24- Secondary file: H:\Cruise_Data\2004-24\CTD\hydro\Updated Nutrient File\2004-24- -SORT parameters: 2004/12/15 11:58:18 Sorted in ascending order of channel Pressure $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0041.sal ---------------------------------------------------- Salinity analyzed onboard John P. Tully by Marie Robert using Salinometer Model 8410, S/N 58879 (Aug.17-23,2004) Flag "f" indicates that the result is the average of duplicates. Flag "c" indicates that there was drift during analysis. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. ------------------------------------------------------------------------- There were major problems with noise due to electrical problems. It primarily affected the primary temperature and all values derived from primary temperature, but also affected other channels. The worst problems were in casts 6, 10, 12 and 14, but all CTD data should be used with caution. The temperature data is considered to be of lower quality than usual for this instrument. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.309E-01 1.0785) Salinity:T1:C1 PSS-78 10 -99 () (-0.118E-01 1) Salinity:T1:C1 PSS-78 10 -99 () (0.7E-03 1) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7--- ---8---- 9- -10- ---11--- - ---13-- --14- - --16- - --18-- - !Samp Pressu Temperat Trans Fluores PAR Oxygen Salinity Bo Numb Salinity F Oxygen: Nitra F Silic F Phosph F !le_ re ure: missi cence: : :T1:C1 tt er_o :Bottle l Dissolv te_ l ate l ate l !Numb Secondar vity URU: Dissol ~u ~bin ~ ed plus_ ~ ~ ~ !er y Seapoin ved: mb _rec l Nitri t t t ! t SBE er ords e te e e e !---- ------ -------- ----- ------- ------ ------ -------- -- ---- -------- - ------- ----- - ----- - ------ - *END OF HEADER 280 1.9 15.5671 25.7 3.447 264.5 6.98 31.8567 21 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 279 1.9 15.5204 18.5 3.345 234.9 7.03 31.8657 20 69 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 278 2.1 15.5526 25.1 3.347 257.3 7.02 31.8592 19 69 31.8726 0 7.050 0.3 0 16.2 0 0.38 0 272 4.1 15.1244 31.4 3.535 82.6 6.95 31.9185 13 65 31.9435 0 6.941 1.0 0 15.9 0 0.44 0 274 4.3 15.5357 30.7 3.997 84.3 6.94 31.8726 15 60 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 277 4.5 15.4989 31.4 4.106 70.7 6.77 31.8815 18 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 276 4.5 15.5149 31.1 4.185 78.8 7.02 31.8788 17 67 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 275 4.5 15.5452 31.2 4.130 72.7 7.00 31.8798 16 56 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 273 4.5 15.2471 32.7 3.639 75.3 6.98 31.9044 14 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 270 4.9 15.2456 28.8 3.760 65.3 6.83 31.8863 11 65 31.9852 0 6.887 1.7 0 15.9 0 0.50 0 271 5.1 14.2827 28.7 3.681 63.9 6.93 32.0254 12 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 268 10.4 11.4599 48.4 2.180 15.1 6.33 32.3181 9 82 32.2949 0 6.444 6.4 0 14.8 0 0.89 0 269 10.5 11.3885 45.9 2.037 15.1 6.35 32.3259 10 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 266 15.6 9.7307 54.9 1.517 6.5 5.13 32.4501 7 53 32.4432 0 5.540 14.7 0 22.6 0 1.46 0 267 15.9 9.6884 53.3 1.464 6.3 5.16 32.4601 8 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 264 29.8 8.7548 56.7 0.695 1.6 5.19 32.6155 5 69 32.6098 0 5.365 15.2 0 18.3 0 1.42 0 265 29.9 8.7486 56.7 0.664 1.6 5.19 32.6179 6 120 -99.0000 0 -99.000 -99.0 0 -99.0 0 -99.00 0 263 75.1 7.1911 59.0 0.085 0.6 3.07 33.5675 4 121 33.5695 0 3.085 28.9 0 40.9 0 2.20 0 262 102.1 7.0189 59.4 0.078 0.5 2.62 33.7292 3 121 33.7248 0 2.693 30.9 0 45.5 0 2.33 0 261 125.5 6.7741 51.9 0.072 0.5 1.73 33.9099 2 121 33.9082 0 1.759 34.3 0 60.9 0 2.65 0 260 141.7 6.7763 51.8 0.074 0.5 1.79 33.9145 1 121 33.9210 3 1.927 34.5 0 60.3 0 2.63 0