*2014/11/20 09:54:29.78 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/08/15 15:38:12.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 13 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 137 165 2 Pressure decibar 21.5 2500.9 3 Temperature:Secondary 'deg C (ITS90)' 1.6613 12.5569 4 Transmissivity %/metre 52.5 63.1 5 Fluorescence:URU:Seapoint mg/m^3 0.52E-01 2.366 6 Oxygen:Dissolved:SBE mL/L 0.71 6.01 7 Salinity:T1:C1 PSS-78 31.9215 34.6382 8 Bottle_Number n/a 1 13 9 Number_of_bin_records n/a 70 121 10 Salinity:Bottle PSS-78 33.3132 34.6395 11 Flag:Salinity:Bottle n/a 12 Oxygen:Dissolved mL/L 0.286 4.252 13 Flag:Oxygen:Dissolved n/a 14 Nitrate umol/L 23.7 45.2 15 Flag:Nitrate n/a 16 Silicate umol/L 30.7 178.6 17 Flag:Silicate n/a 18 Phosphate umol/L 1.81 3.26 19 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 3 I I 0 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' 8 F ' ' 3 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 6 F R4 1 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-24 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Central Coast B.C. BioChemical Study SCIENTIST : Ianson D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : SS2.5 EVENT NUMBER : 27 LATITUDE : 51 0.01000 N ! (deg min) LONGITUDE : 130 50.11000 W ! (deg min) WATER DEPTH : 2650 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 75636 temperature:secondary ' ' 2710 conductivity:secondary ' ' 2128 Fluorometer ' ' Seapoint transmissometer:primary ' ' 498DR Oxygen:SBE ' ' 0043 altimeter: ' ' ' ' irradiance:primary ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.31A Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.add ---------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.9 2004/12/09 16:15:46 1521 1521 CLEAN 4.7.1 2004/12/09 16:16:32 ? ? ADDSAMP 3.4 2004/12/09 16:17:32 1521 1521 BINAVE 4.0.1 2004/12/09 16:18:24 1521 13 MERGE 3.3 2004/12/09 16:19:53 13 13 MERGE 3.3 2004/12/09 16:39:08 13 13 MERGE 3.3 2004/12/09 16:39:20 13 13 CALIB 11.4 2004/12/09 17:19:26 13 13 CLEAN 4.7.1 2004/12/09 17:27:31 13 13 SORT 3.5 2004/12/09 17:27:59 13 13 REMOVECH 6.0 2004/12/09 17:30:28 13 13 HDREDIT2 2.3 2004/12/09 17:33:25 ? ? CALIB 11.4 2004/12/10 12:01:36 13 13 CHANGE_FLAGS 1.0 2013/07/16 11:47:50 13 13 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:31:23 13 13 CHANGE_FLAGS 2.0 2014/11/20 09:54:29 13 13 $END $REMARKS -CLEAN functions: 2004/12/09 16:16:12 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-24\CTD\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2004/12/09 16:19:52 2004/12/09 16:19: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.samavg Secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.sal Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.sal ---------------------------------------------------- -HEADER EDITS: 2004/11/22 14:07:13 Applied edit header: Q:\Cruise_Data\2004-24\CTD\doc\2004-24-Salinity.HDR -The following MERGE parameters were used: 2004/12/09 16:39:07 2004/12/09 16:39: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.mrg1 Secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.add Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.add ---------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following MERGE parameters were used: 2004/12/09 16:39:19 2004/12/09 16:39: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate, Flag:Nitrate, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0027.mrg2 Secondary file: Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0027.nuts Comments from secondary file: Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0027.nuts ----------------------------------------------------- -HEADER EDITS: 2004/11/22 15:33:59 Applied edit header: Q:\Cruise_Data\2004-24\CTD\doc\2004-24-NUTRIENTS.HDR -SORT parameters: 2004/11/22 15:34:06 Sorted in ascending order of channel Sample_Number -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-24\ctd\doc\2004-24-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Oxygen:Dissolved:SBE mL/L 10 -0.3090000E-01 0.1078500E+01 17 Salinity:T1:C1 PSS-78 10 -0.1180000E-01 0.1000000E+01 -CLEAN functions: 2004/12/09 17:27:30 20 Change Pad Value to -99 in Channel: Oxygen:Dissolved [mL/L] Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel Pressure [decibar] is in the range 1000 to 10000 14 data records in pad range. Remove Sea-Bird comments from the header. -SORT parameters: 2004/12/09 17:27:59 Sorted in ascending order of channel Pressure -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Primary Conductivity:Primary Conductivity:Secondary PAR Oxygen:Voltage:SBE Altimeter Descent_Rate Status:Pump Salinity:T0:C0 Flag -HEADER EDITS: 2004/12/09 17:33:25 Applied edit header: Q:\Cruise_Data\2004-24\CTD\doc\bottle_hdr.txt Channel 2: Pressure [dbars] Units ==> dbars Format: F10.3 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 9: Number_of_bin_records [n/a] Format: F5.0 ==> I5 -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-24\ctd\doc\2004-24-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 7 Salinity:T1:C1 PSS-78 10 0.7000000E-03 0.1000000E+01 $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.sal ---------------------------------------------------- Salinity analyzed onboard John P. Tully by Marie Robert using Salinometer Model 8410, S/N 58879 (Aug.17-23,2004) Flag "f" indicates that the result is the average of duplicates. Flag "c" indicates that there was drift during analysis. Comments from secondary file: Q:\Cruise_Data\2004-24\CTD\newhydro\2004-24-0027.add ---------------------------------------------------- Oxygen Sample #62: A duplicate sample was bad DO = 318.805 Comments from secondary file: Q:\Cruise_Data\2004-24\ctd\newhydro\2004-24-0027.nuts ----------------------------------------------------- Nutrients analyzed fresh onboard JP Tully by Melissa Hennekes August 13 - 18, 2004 Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. ------------------------------------------------------------------------- There were major problems with noise due to electrical problems. It primarily affected the primary temperature and all values derived from primary temperature, but also affected other channels. The worst problems were in casts 6, 10, 12 and 14, but all CTD data should be used with caution. The temperature data is considered to be of lower quality than usual for this instrument. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.309E-01 1.0785) Salinity:T1:C1 PSS-78 10 -99 () (-0.118E-01 1) Salinity:T1:C1 PSS-78 10 -99 () (0.7E-03 1) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- ---7---- 8- -9-- ---10--- - ---12-- - --14- - --16- - --18-- - !Samp Pressu Temperat Trans Fluores Oxygen Salinity Bo Numb Salinity F Oxygen: F Nitra F Silic F Phosph F !le_ re ure: missi cence: : :T1:C1 tt er_o :Bottle l Dissolv l te l ate l ate l !Numb Secondar vity URU: Dissol ~u ~bin ~ ed ~ ~ ~ ~ !er y Seapoin ved: mb _rec l e t t t ! t SBE er ords e d e e e !---- ------ -------- ----- ------- ------ -------- -- ---- -------- - ------- - ----- - ----- - ------ - *END OF HEADER 165 21.5 12.5569 52.5 2.313 6.01 31.9215 13 120 -99.0000 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 162 21.6 12.5219 52.5 2.329 6.00 31.9261 10 121 -99.0000 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 163 21.6 12.5146 52.5 2.342 6.01 31.9250 11 121 -99.0000 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 164 21.8 12.5473 52.5 2.366 6.01 31.9246 12 70 -99.0000 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 145 101.1 7.1603 61.0 0.068 4.18 33.3152 9 121 33.3132 6 4.252 0 23.7 0 30.7 0 1.81 0 144 200.9 5.9702 61.6 0.062 3.20 33.8371 8 121 33.8360 0 3.244 0 31.2 0 50.2 0 2.20 0 143 300.3 5.3731 62.1 0.063 1.76 33.9407 7 121 33.9382 0 1.846 0 38.1 0 67.3 0 2.69 0 142 502.2 4.5453 62.8 0.062 0.71 34.0855 6 121 34.0855 0 0.769 0 42.9 0 94.1 0 3.06 0 141 1001.6 3.3188 62.7 0.064 -99.00 34.3685 5 121 34.3684 0 0.286 0 45.2 0 137.2 0 3.26 0 140 1502.9 2.3939 63.0 0.060 -99.00 34.5026 4 121 34.5022 0 0.628 0 44.9 0 163.7 0 3.18 0 139 2002.7 1.9322 63.1 0.056 -99.00 34.5866 3 121 34.5873 0 1.343 0 43.6 0 173.7 0 3.04 0 137 2500.8 1.6613 62.6 0.052 -99.00 34.6382 1 121 34.6362 0 2.256 0 40.9 0 178.6 0 2.88 0 138 2500.9 1.6613 62.6 0.052 -99.00 34.6382 2 121 34.6395 0 2.126 0 41.1 0 177.5 0 2.88 0