*2014/11/20 09:54:18.80 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/06/14 13:50:04.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 21 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 407 430 2 Pressure decibar 2.6 2002 3 Temperature:Primary 'deg C (ITS90)' 2.0116 10.9616 4 Transmissivity %/metre 49.6 62.4 5 Oxygen:Dissolved:SBE mL/L 0.3417 6.9144 6 Fluorescence:URU:Seapoint mg/m^3 0.122 2.427 7 Bottle_Number n/a 1 24 8 Salinity:T0:C0 PSS-78 32.0451 34.5706 9 Number_of_bin_records n/a 118 121 10 Salinity:Bottle PSS-78 32.0469 34.5725 11 Flag:Salinity:Bottle n/a 12 Oxygen:Dissolved mL/L 0.301 6.876 13 Flag:Oxygen:Dissolved n/a 14 Nitrate_plus_Nitrite umol/L 4.7 45 15 Flag:Nitrate_plus_Nitrite n/a 16 Silicate umol/L 11.3 172 17 Flag:Silicate n/a 18 Phosphate umol/L 0.79 3.29 19 Flag:Phosphate n/a 20 Chlorophyll:Extracted mg/m^3 0.2E-01 0.5 21 Flag:Chlorophyll:Extracted n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ------ ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99.99 ' ' 8 F ' ' 3 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' ' ' F6.1 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F6.1 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' ' ' F7.2 R4 ' ' 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' ' ' F7.2 R4 ' ' 21 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : ED14W EVENT NUMBER : 89 LATITUDE : 52 5.03000 N ! (deg min) LONGITUDE : 134 44.98000 W ! (deg min) WATER DEPTH : 3313 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.add ------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:29 2904 2904 CLEAN 4.7 2004/08/02 13:53:07 ? ? ADDSAMP 3.4 2004/08/04 17:32:47 2904 2904 BINAVE 4.0.1 2004/08/04 17:34:35 2904 24 MERGE 3.1 2004/08/05 08:47:53 24 24 MERGE 3.1 2004/08/05 08:56:21 24 24 CALIB 11.4 2004/08/13 14:37:16 24 24 CLEAN 4.7 2004/08/17 12:47:07 ? ? SORT 3.4.1 2004/08/17 12:49:27 24 24 REMOVECH 6.0 2004/08/17 12:53:55 24 24 HDREDIT2 2.2 2004/08/17 13:01:53 ? ? CALIB 11.4 2004/09/29 14:45:46 24 24 SORT 3.5 2004/11/03 15:51:07 24 24 MERGE 3.3 2004/11/03 15:51:52 24 24 SORT 3.5 2004/11/03 16:00:23 24 24 HDREDIT2 2.3 2004/12/07 14:39:00 ? ? REMOVECH 6.0 2005/02/04 11:29:32 24 24 CALIB 11.6 2005/10/12 13:52:21 24 24 CHANGE_FLAGS 1.0 2013/07/29 14:29:41 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:15 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:54:18 24 24 $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.add Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0089.add ------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank Channel 13: Oxygen:Dissolved [mL/L] (no changes) Channel 14: Flag:Oxygen:Dissolved [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:07 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2004/11/03 15:51:50 2004/11/03 15:51: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0089.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0089.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0089.mrg ------------------------------------------------ -The following MERGE parameters were used: 2004/11/03 14:59:15 2004/11/03 14:59: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0089.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0089.chl -SORT parameters: 2004/11/03 16:00:23 Sorted in ascending order of channel Pressure -HEADER EDITS: 2004/12/07 14:39:00 Applied edit header: H:\STNPCHEM\Work\HEADERS\Geographic Area.txt -The following CHANNEL(S) were removed from file. PAR -CALIB parameters: 2005/10/12 13:52:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- ---6--- 7- ---8---- -9-- ---10--- - ---12-- - --14- - --16- - --18-- - --20-- - !Samp Pressu Temperat Trans Oxygen Fluores Bo Salinity Numb Salinity F Oxygen: F Nitra F Silic F Phosph F Chloro F !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv l te_ l ate l ate l phyll: l !Numb Primary vity Dissol URU: ~u ~bin ~ ed ~ plus_ ~ ~ ~ Extrac ~ !er ved: Seapoin mb _rec l e Nitri t t t ted e ! SBE t er ords e d te e e e d !---- ------ -------- ----- ------ ------- -- -------- ---- -------- - ------- - ----- - ----- - ------ - ------ - *END OF HEADER 430 2.6 10.9616 49.6 6.71 0.448 24 32.0451 118 32.0474 0 6.653 0 4.8 0 11.4 0 0.82 0 0.48 0 429 5.7 10.9570 51.2 6.70 0.601 23 32.0453 121 32.0475 0 6.641 0 4.8 0 11.4 0 0.82 0 0.47 0 428 5.7 10.9548 51.5 6.70 0.611 22 32.0453 121 32.0469 0 6.657 0 4.8 0 11.3 0 0.82 0 0.44 0 427 10.6 10.9452 51.7 6.70 0.936 21 32.0453 121 32.0470 0 6.640 0 4.7 0 11.3 0 0.80 0 0.42 0 426 15.6 10.9440 51.8 6.70 1.289 20 32.0455 121 32.0472 0 6.657 0 4.8 0 11.3 0 0.80 0 0.39 0 425 21.9 10.7991 51.1 6.73 2.041 19 32.0492 121 32.0499 0 6.671 0 4.8 0 11.3 0 0.79 0 0.48 0 424 26.3 10.4431 52.2 6.80 2.427 18 32.0683 121 32.0662 0 6.737 0 5.0 0 11.3 0 0.82 0 0.49 0 423 30.4 9.5729 55.1 6.91 1.702 17 32.0986 121 32.0994 0 6.876 0 5.8 0 11.3 0 0.88 0 0.37 0 422 51.1 8.2766 57.9 6.69 0.974 16 32.1251 121 32.1258 0 6.648 0 9.8 0 13.5 0 1.08 0 0.50 0 421 54.8 8.0572 58.6 6.67 0.786 15 32.1315 121 32.1309 0 6.623 0 10.3 0 13.7 0 1.10 0 0.44 0 420 113.0 7.8366 61.2 6.14 0.131 14 32.3592 121 32.3475 0 6.120 0 13.6 0 17.9 0 1.29 0 0.02 0 419 141.8 7.9217 61.3 5.28 0.126 13 32.6205 121 32.6124 0 5.304 0 17.5 0 24.4 0 1.54 0 -99.00 0 418 166.5 7.8132 61.2 4.53 0.122 12 32.8397 120 32.8363 0 4.560 0 21.3 0 30.6 0 1.77 0 -99.00 0 417 187.3 7.5775 61.3 3.95 0.124 11 33.0455 121 33.0445 0 3.940 0 24.2 0 35.6 0 1.96 0 -99.00 0 416 203.5 7.3304 61.3 3.40 0.124 10 33.2356 121 33.2298 0 3.423 0 26.9 0 41.3 0 2.12 0 -99.00 0 415 233.6 7.1166 61.2 2.93 0.126 9 33.4745 121 33.4711 0 2.909 0 29.2 0 44.8 0 2.25 0 -99.00 0 414 268.0 6.9544 61.3 2.40 0.125 8 33.6896 121 33.6874 0 2.377 0 31.9 0 50.0 0 2.41 0 -99.00 0 413 359.7 6.5006 61.4 2.06 0.126 7 33.8720 121 33.8722 0 2.032 0 34.2 0 56.3 0 2.52 0 -99.00 0 412 500.8 5.4749 61.9 1.60 0.130 6 33.9640 121 33.9632 0 1.579 0 38.2 0 69.9 0 2.75 0 -99.00 0 411 676.9 4.5279 62.1 0.80 0.134 5 34.0851 121 34.0843 0 0.792 0 42.2 0 93.4 0 3.07 0 -99.00 0 410 875.4 3.8347 62.2 0.36 0.136 4 34.2383 121 34.2382 0 0.344 0 44.5 0 117.8 0 3.23 0 -99.00 0 409 1210.6 3.0470 62.3 0.34 0.135 3 34.3976 121 34.3998 0 0.301 0 45.0 0 144.8 0 3.29 0 -99.00 0 408 1501.9 2.5439 62.4 0.52 0.134 2 34.4756 121 34.4763 0 0.524 0 44.5 0 160.0 0 3.21 0 -99.00 0 407 2002.0 2.0116 62.4 1.18 0.131 1 34.5706 121 34.5725 0 1.184 0 42.6 0 172.0 0 3.07 0 -99.00 0