*2014/11/20 09:54:18.74 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/06/14 09:30:00.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 21 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 386 406 2 Pressure decibar 2 2003.4 3 Temperature:Primary 'deg C (ITS90)' 1.9784 10.8956 4 Transmissivity %/metre 48.8 62.4 5 Oxygen:Dissolved:SBE mL/L 0.3417 6.7536 6 Fluorescence:URU:Seapoint mg/m^3 0.122 3.675 7 Bottle_Number n/a 1 21 8 Salinity:T0:C0 PSS-78 32.0533 34.5762 9 Number_of_bin_records n/a 120 121 10 Salinity:Bottle PSS-78 32.054 34.5775 11 Flag:Salinity:Bottle n/a 12 Oxygen:Dissolved mL/L 0.308 6.764 13 Flag:Oxygen:Dissolved n/a 14 Nitrate_plus_Nitrite umol/L 4.4 44.7 15 Flag:Nitrate_plus_Nitrite n/a 16 Silicate umol/L 11.4 172.4 17 Flag:Silicate n/a 18 Phosphate umol/L 0.78 3.26 19 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ------ ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99.99 ' ' 8 F ' ' 3 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' ' ' F6.1 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F6.1 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' ' ' F7.2 R4 ' ' 19 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : ED17W EVENT NUMBER : 86 LATITUDE : 52 20.00000 N ! (deg min) LONGITUDE : 134 44.89000 W ! (deg min) WATER DEPTH : 3090 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.add ------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:27 2541 2541 CLEAN 4.7 2004/08/02 13:53:04 ? ? ADDSAMP 3.4 2004/08/04 17:32:44 2541 2541 BINAVE 4.0.1 2004/08/04 17:34:34 2541 21 MERGE 3.1 2004/08/05 08:47:53 21 21 MERGE 3.1 2004/08/05 08:56:21 21 21 CALIB 11.4 2004/08/13 14:37:16 21 21 CLEAN 4.7 2004/08/17 12:47:07 ? ? SORT 3.4.1 2004/08/17 12:49:27 21 21 REMOVECH 6.0 2004/08/17 12:53:54 21 21 HDREDIT2 2.2 2004/08/17 13:01:53 ? ? CALIB 11.4 2004/09/29 14:45:46 21 21 SORT 3.5 2004/11/03 15:51:06 21 21 MERGE 3.3 2004/11/03 15:51:52 21 21 SORT 3.5 2004/11/03 16:00:23 21 21 HDREDIT2 2.3 2004/12/07 14:38:57 ? ? REMOVECH 6.0 2005/02/04 11:29:32 21 21 REMOVECH 7.0 2005/03/24 13:08:36 21 21 CALIB 11.6 2005/10/12 13:52:20 21 21 CHANGE_FLAGS 1.0 2013/07/29 14:29:41 21 21 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:15 21 21 CHANGE_FLAGS 2.0 2014/11/20 09:54:18 21 21 $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.add Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0086.add ------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank Channel 13: Oxygen:Dissolved [mL/L] (no changes) Channel 14: Flag:Oxygen:Dissolved [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:06 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2004/11/03 15:51:50 2004/11/03 15:51: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0086.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0086.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0086.mrg ------------------------------------------------ -The following MERGE parameters were used: 2004/11/03 14:59:15 2004/11/03 14:59: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0086.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0086.chl -SORT parameters: 2004/11/03 16:00:23 Sorted in ascending order of channel Pressure -HEADER EDITS: 2004/12/07 14:38:57 Applied edit header: H:\STNPCHEM\Work\HEADERS\Geographic Area.txt -The following CHANNEL(S) were removed from file. PAR -REMOVECH 2005/03/24 13:08:36 The following CHANNEL(S) were removed: Chlorophyll:Extracted [mg/m^3] Flag:Chlorophyll:Extracted -CALIB parameters: 2005/10/12 13:52:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- ---6--- 7- ---8---- -9-- ---10--- - ---12-- - --14- - --16- - --18-- - !Samp Pressu Temperat Trans Oxygen Fluores Bo Salinity Numb Salinity F Oxygen: F Nitra F Silic F Phosph F !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv l te_ l ate l ate l !Numb Primary vity Dissol URU: ~u ~bin ~ ed ~ plus_ ~ ~ ~ !er ved: Seapoin mb _rec l e Nitri t t t ! SBE t er ords e d te e e e !---- ------ -------- ----- ------ ------- -- -------- ---- -------- - ------- - ----- - ----- - ------ - *END OF HEADER 406 2.0 10.8956 49.4 6.70 2.060 21 32.0533 120 32.0540 0 6.647 0 4.5 0 11.4 0 0.78 0 405 6.1 10.8900 51.3 6.69 2.068 20 32.0536 121 32.0545 0 6.633 0 4.4 0 11.4 0 0.80 0 404 10.4 10.8953 51.6 6.69 2.027 19 32.0535 121 32.0547 0 6.641 0 4.5 0 11.5 0 0.80 0 403 26.6 10.6253 48.8 6.75 3.675 18 32.0588 121 32.0582 0 6.764 0 4.4 0 11.5 0 0.80 0 402 50.6 8.6368 57.7 6.73 1.025 17 32.1073 121 32.1088 0 6.712 0 8.3 0 12.6 0 1.03 0 401 61.0 8.0162 59.5 6.65 0.621 16 32.1247 121 32.1263 0 6.635 0 10.3 0 13.5 0 1.14 0 400 107.6 7.8375 61.1 6.21 0.133 15 32.3367 121 32.3386 0 6.196 0 12.4 0 16.1 0 1.25 0 399 128.6 7.8722 61.2 5.56 0.123 14 32.5653 121 32.5600 0 5.596 0 15.6 0 20.9 0 1.43 0 398 146.7 7.8021 61.2 4.71 0.122 13 32.8363 121 32.8189 0 4.775 0 19.6 0 27.1 0 1.68 0 397 160.0 7.6384 61.2 4.26 0.126 12 33.0151 121 33.0126 0 4.292 0 22.4 0 31.2 0 1.84 0 396 166.9 7.5083 61.2 4.00 0.123 11 33.1314 121 33.1294 0 3.987 0 24.0 0 33.8 0 1.94 0 395 173.2 7.4115 61.2 3.81 0.124 10 33.2200 121 33.2075 0 3.801 0 24.8 0 35.2 0 1.97 0 394 196.7 7.1263 61.2 3.44 0.123 9 33.4663 121 33.4580 0 3.464 0 27.4 0 38.9 0 2.10 0 393 226.9 6.9105 61.3 2.93 0.128 8 33.6901 121 33.6865 0 2.927 0 29.9 0 44.1 0 2.25 0 392 303.9 6.4364 61.4 2.41 0.130 7 33.8676 121 33.8671 0 2.387 0 33.1 0 53.4 0 2.42 0 391 427.3 5.3264 61.7 1.71 0.131 6 33.9434 121 33.9431 0 1.689 0 38.0 0 69.6 0 2.74 0 390 616.2 4.4869 62.1 0.84 0.134 5 34.0727 120 34.0719 0 0.822 0 42.6 0 93.2 0 3.05 0 389 847.8 3.7769 62.2 0.37 0.135 4 34.2355 121 34.2346 0 0.336 0 44.1 0 118.2 0 3.21 0 388 1195.8 3.0358 62.3 0.34 0.136 3 34.3979 121 34.3967 0 0.308 0 44.7 0 144.5 0 3.26 0 387 1826.2 2.1198 62.4 0.95 0.134 2 34.5486 121 34.5495 0 0.933 0 43.3 0 169.9 0 3.10 0 386 2003.4 1.9784 62.4 1.24 0.131 1 34.5762 121 34.5775 0 1.793 0 42.3 0 172.4 0 3.06 0