*2014/11/20 09:54:18.61 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/06/14 01:20:47.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 15 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 360 383 2 Pressure decibar 2000.5 2002.5 3 Temperature:Primary 'deg C (ITS90)' 1.9482 1.9496 4 Transmissivity %/metre 62.7 62.7 5 Oxygen:Dissolved:SBE mL/L 1.29 1.29 6 Fluorescence:URU:Seapoint mg/m^3 0.129 0.132 7 Bottle_Number n/a 1 24 8 Salinity:T0:C0 PSS-78 34.5809 34.5813 9 Number_of_bin_records n/a 52 120 10 Salinity:Bottle PSS-78 34.5801 34.5831 11 Flag:Salinity:Bottle n/a 12 Carbon:Dissolved:Inorganic umol/kg 2375.69 2386.66 13 Flag:Carbon:Dissolved:Inorganic n/a 14 Alkalinity:Total umol/kg 2425.37 2432.69 15 Flag:Alkalinity:Total n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' ' ' F8.2 R4 ' ' 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' ' ' F8.2 R4 ' ' 15 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : ED27W EVENT NUMBER : 83 LATITUDE : 53 10.06000 N ! (deg min) LONGITUDE : 134 44.97000 W ! (deg min) WATER DEPTH : 2777 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:26 1737 1737 CLEAN 4.7 2004/08/02 13:53:01 ? ? ADDSAMP 3.4 2004/08/04 17:32:42 1737 1737 BINAVE 4.0.1 2004/08/04 17:34:32 1737 24 MERGE 3.1 2004/08/05 08:47:53 24 24 MERGE 3.1 2004/08/05 08:56:21 24 24 CALIB 11.4 2004/08/13 14:37:15 24 24 CLEAN 4.7 2004/08/17 12:47:06 ? ? SORT 3.4.1 2004/08/17 12:49:27 24 24 REMOVECH 6.0 2004/08/17 12:53:54 24 24 HDREDIT2 2.2 2004/08/17 13:01:53 ? ? CALIB 11.4 2004/09/29 14:45:45 24 24 HDREDIT2 2.3 2004/12/07 14:38:49 ? ? REMOVECH 6.0 2005/02/04 11:29:32 24 24 CALIB 11.6 2005/10/12 13:52:20 24 24 SORT 3.5 2010/04/05 15:47:50 24 24 MERGE 3.3 2010/04/05 15:54:58 24 24 HDREDIT2 2.5.1 2010/04/05 15:59:50 ? ? SORT 3.5 2010/04/05 16:05:18 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:47:42 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:15 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:54:18 24 24 $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0083.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0083.sal -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0083.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0083.add -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -HEADER EDITS: 2004/12/07 14:38:49 Applied edit header: H:\STNPCHEM\Work\HEADERS\Geographic Area.txt -The following CHANNEL(S) were removed from file. PAR -CALIB parameters: 2005/10/12 13:52:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 -SORT parameters: 2010/04/05 15:47:50 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/04/05 15:54:57 2010/04/05 15:54:57 2010/04/05 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0083.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0083.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0083.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/04/05 15:47:18 Sorted in ascending order of channel Sample_Number -HEADER EDITS: 2010/04/05 15:59:50 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK.txt -SORT parameters: 2010/04/05 16:05:18 Sorted in ascending order of channel Pressure $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. Complete documentation on DIC and ALK sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0083.iossrt --------------------------------------------------------------------------- Sample_Number 364: large difference between replicate samples and from replicate niskins Sample_Number 360: large difference between replicates *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- ---6--- 7- ---8---- -9-- ---10--- - ---12-- 13 ---14-- 15 !Samp Pressu Temperat Trans Oxygen Fluores Bo Salinity Numb Salinity F Carbon: Fl Alkalin Fl !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv ag ity: ag !Numb Primary vity Dissol URU: ~u ~bin ~ ed: ~g Total ~T !er ved: Seapoin mb _rec l Inorgan an ot ! SBE t er ords e ic ic al !---- ------ -------- ----- ------ ------- -- -------- ---- -------- - ------- -- ------- -- *END OF HEADER 370 2000.5 1.9494 62.7 1.29 0.131 11 34.5812 57 34.5801 0 -99.00 0 -99.00 0 372 2000.5 1.9492 62.7 1.29 0.132 13 34.5811 70 34.5808 0 -99.00 0 -99.00 0 367 2000.6 1.9493 62.7 1.29 0.131 8 34.5812 62 34.5819 0 -99.00 0 -99.00 0 362 2000.7 1.9493 62.7 1.29 0.130 3 34.5810 102 34.5805 0 2385.92 6 2426.78 6 369 2000.8 1.9494 62.7 1.29 0.131 10 34.5810 74 34.5814 0 -99.00 0 -99.00 0 378 2000.9 1.9487 62.7 1.29 0.131 19 34.5813 66 34.5806 0 -99.00 0 -99.00 0 380 2001.1 1.9486 62.7 1.29 0.130 21 34.5811 52 34.5816 0 -99.00 0 -99.00 0 381 2001.2 1.9486 62.7 1.29 0.131 22 34.5813 64 34.5812 0 -99.00 0 -99.00 0 366 2001.3 1.9493 62.7 1.29 0.130 7 34.5810 61 34.5818 0 -99.00 0 -99.00 0 373 2001.3 1.9489 62.7 1.29 0.131 14 34.5812 53 34.5813 0 -99.00 0 -99.00 0 377 2001.3 1.9488 62.7 1.29 0.132 18 34.5811 66 34.5812 0 -99.00 0 -99.00 0 360 2001.4 1.9492 62.7 1.29 0.130 1 34.5811 64 34.5824 0 2386.66 6 2427.01 36 365 2001.4 1.9493 62.7 1.29 0.130 6 34.5811 107 34.5812 0 -99.00 0 -99.00 0 375 2001.4 1.9487 62.7 1.29 0.131 16 34.5812 65 34.5818 0 -99.00 0 -99.00 0 376 2001.5 1.9488 62.7 1.29 0.129 17 34.5812 75 34.5817 0 -99.00 0 -99.00 0 382 2001.5 1.9484 62.7 1.29 0.131 23 34.5812 72 34.5812 0 -99.00 0 -99.00 0 383 2001.6 1.9482 62.7 1.29 0.130 24 34.5813 120 34.5831 0 -99.00 0 -99.00 0 364 2001.7 1.9496 62.7 1.29 0.130 5 34.5809 57 34.5811 0 2375.69 46 2425.37 6 363 2001.8 1.9494 62.7 1.29 0.131 4 34.5812 59 34.5808 0 2382.58 6 2432.69 6 374 2002.0 1.9489 62.7 1.29 0.130 15 34.5812 57 34.5813 0 -99.00 0 -99.00 0 371 2002.3 1.9493 62.7 1.29 0.131 12 34.5811 84 34.5806 0 -99.00 0 -99.00 0 379 2002.3 1.9486 62.7 1.29 0.131 20 34.5812 94 34.5808 0 -99.00 0 -99.00 0 361 2002.5 1.9492 62.7 1.29 0.130 2 34.5811 80 34.5809 0 2386.26 6 2429.54 6 368 2002.5 1.9492 62.7 1.29 0.131 9 34.5811 76 34.5816 0 -99.00 0 -99.00 0