*2014/11/20 09:54:18.49 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/06/11 20:59:12.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 312 335 2 Pressure decibar 1.4 998.3 3 Temperature:Primary 'deg C (ITS90)' 2.9965 9.3289 4 Transmissivity %/metre 47.4 53.4 5 Oxygen:Dissolved:SBE mL/L 0.33165 7.2159 6 PAR uE/m^2/sec 0.4 0.4 7 Fluorescence:URU:Seapoint mg/m^3 0.134 1.158 8 Bottle_Number n/a 1 24 9 Salinity:T0:C0 PSS-78 32.3786 34.3737 10 Number_of_bin_records n/a 78 121 11 Salinity:Bottle PSS-78 32.3778 34.3749 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 0.25 7.273 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 8.3 45.2 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 11.4 147.7 18 Flag:Silicate n/a 19 Phosphate umol/L 0.91 3.38 20 Flag:Phosphate n/a 21 Chlorophyll:Extracted mg/m^3 0.11 0.35 22 Flag:Chlorophyll:Extracted n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ------ ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 3 I I 0 9 -99 ' ' 9 F ' ' 4 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 2 NQ C ' ' 13 -99.99 ' ' 8 F ' ' 3 14 0 ' ' 2 NQ C ' ' 15 -99 ' ' ' ' F6.1 R4 ' ' 16 0 ' ' 2 NQ C ' ' 17 -99 ' ' ' ' F6.1 R4 ' ' 18 0 ' ' 2 NQ C ' ' 19 -99 ' ' ' ' F7.2 R4 ' ' 20 0 ' ' 2 NQ C ' ' 21 -99 ' ' ' ' F7.2 R4 ' ' 22 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : R17 EVENT NUMBER : 52 LATITUDE : 51 2.02000 N ! (deg min) LONGITUDE : 140 55.99000 W ! (deg min) WATER DEPTH : 3053 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.add ------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:21 2814 2814 CLEAN 4.7 2004/08/02 13:52:55 ? ? ADDSAMP 3.4 2004/08/04 17:32:35 2814 2814 BINAVE 4.0.1 2004/08/04 17:34:29 2814 24 MERGE 3.1 2004/08/05 08:47:53 24 24 MERGE 3.1 2004/08/05 08:56:21 24 24 CALIB 11.4 2004/08/13 14:37:15 24 24 CLEAN 4.7 2004/08/17 12:47:06 ? ? SORT 3.4.1 2004/08/17 12:49:26 24 24 REMOVECH 6.0 2004/08/17 12:53:54 24 24 HDREDIT2 2.2 2004/08/17 13:01:53 ? ? CALIB 11.4 2004/09/29 14:45:44 24 24 SORT 3.5 2004/11/03 15:51:06 24 24 MERGE 3.3 2004/11/03 15:51:51 24 24 SORT 3.5 2004/11/03 16:00:23 24 24 HDREDIT2 2.3 2004/12/07 14:38:41 ? ? CALIB 11.6 2005/10/12 13:52:18 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:47:42 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:15 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:54:18 24 24 $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.add Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.add ------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank Channel 13: Oxygen:Dissolved [mL/L] (no changes) Channel 14: Flag:Oxygen:Dissolved [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:06 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2004/11/03 15:51:50 2004/11/03 15:51: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0052.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0052.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0052.mrg ------------------------------------------------ -The following MERGE parameters were used: 2004/11/03 14:59:15 2004/11/03 14:59: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0052.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0052.chl -SORT parameters: 2004/11/03 16:00:23 Sorted in ascending order of channel Pressure -HEADER EDITS: 2004/12/07 14:38:41 Applied edit header: H:\STNPCHEM\Work\HEADERS\Geographic Area.txt -CALIB parameters: 2005/10/12 13:52:18 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0052.add ------------------------------------------------------- Oxygen flag d- I was having colourimeter problems and Sample 313 and 314 were l Sample 314 titrated with a bubble on the lens. No other explanation for the hig value of sample 313. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0052.mrg ------------------------------------------------ Sample_Number 330: did not close Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0052.chl ------------------------------------------------ Sample_Number 334: particles in chl sample Sample_Number 331: particles in chl sample *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- --6--- ---7--- 8- ---9---- -10- ---11--- - ---13-- - --15- - --17- - --19-- - --21-- - !Samp Pressu Temperat Trans Oxygen PAR Fluores Bo Salinity Numb Salinity F Oxygen: F Nitra F Silic F Phosph F Chloro F !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv l te_ l ate l ate l phyll: l !Numb Primary vity Dissol URU: ~u ~bin ~ ed ~ plus_ ~ ~ ~ Extrac ~ !er ved: Seapoin mb _rec l e Nitri t t t ted e ! SBE t er ords e d te e e e d !---- ------ -------- ----- ------ ------ ------- -- -------- ---- -------- - ------- - ----- - ----- - ------ - ------ - *END OF HEADER 335 1.4 9.3289 47.4 6.79 0.4 0.195 24 32.3786 120 32.3802 0 6.842 0 8.4 0 11.4 0 0.98 0 0.23 0 334 6.2 9.3150 48.8 6.79 0.4 0.260 23 32.3789 121 32.3778 0 6.844 0 8.3 0 11.6 0 0.94 0 0.24 0 333 10.2 9.3265 48.9 6.80 0.4 0.212 22 32.3790 121 32.3796 0 6.805 0 8.4 0 11.4 0 0.93 0 0.21 0 332 16.3 9.2729 48.8 6.80 0.4 0.297 21 32.3799 121 32.3803 0 6.850 0 8.3 0 11.4 0 0.91 0 0.24 0 331 26.0 9.2069 48.7 6.81 0.4 0.488 20 32.3820 121 32.3803 0 6.837 0 8.4 0 11.5 0 0.94 0 0.25 0 328 29.2 8.8027 48.5 6.88 0.4 0.532 17 32.3836 112 -99.0000 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 329 29.5 8.8160 48.6 6.88 0.4 0.535 18 32.3831 120 -99.0000 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 325 30.0 8.7795 48.5 6.89 0.4 0.575 14 32.3834 121 -99.0000 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 0.31 0 330 30.1 8.7958 48.6 6.88 0.4 0.525 19 32.3840 121 -99.0000 0 -99.990 0 -99.0 9 -99.0 9 -99.00 9 -99.00 0 326 30.1 8.7559 48.5 6.89 0.4 0.545 15 32.3844 84 -99.0000 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 327 30.3 8.7976 48.5 6.88 0.4 0.595 16 32.3830 78 -99.0000 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 324 50.6 7.0683 48.7 7.22 0.4 1.158 13 32.4417 121 32.4400 0 7.273 0 9.8 0 13.5 0 1.07 0 0.35 0 323 76.8 6.6416 51.1 6.89 0.4 0.778 12 32.4884 120 32.4861 0 6.978 0 12.0 0 16.8 0 1.34 0 0.33 0 322 100.3 5.7852 52.6 5.23 0.4 0.317 11 33.0650 121 33.0367 0 5.354 0 22.0 0 31.7 0 1.67 0 0.11 0 321 125.0 5.1460 52.8 4.58 0.4 0.161 10 33.4390 121 33.4384 0 4.656 0 27.4 0 42.3 0 1.99 0 -99.00 0 320 151.3 5.0202 52.7 4.01 0.4 0.143 9 33.5870 121 33.5840 0 4.039 0 29.7 0 49.6 0 2.10 0 -99.00 0 319 176.1 4.9769 52.7 3.06 0.4 0.135 8 33.7446 121 33.7430 0 3.105 0 33.6 0 60.5 0 2.36 0 -99.00 0 318 200.4 4.7394 52.8 2.46 0.4 0.134 7 33.7987 121 33.7988 0 2.525 0 36.2 0 68.3 0 2.71 0 -99.00 0 317 251.3 4.4614 52.9 1.81 0.4 0.134 6 33.8561 121 33.8533 0 1.811 0 39.7 0 77.4 0 2.94 0 -99.00 0 316 301.6 4.2903 53.1 1.51 0.4 0.135 5 33.8900 121 33.8893 0 1.538 0 41.0 0 83.5 0 3.03 0 -99.00 0 315 401.0 4.0909 53.2 1.05 0.4 0.134 4 34.0023 121 34.0014 0 1.048 0 43.1 0 97.0 0 3.18 0 -99.00 0 314 602.8 3.7505 53.4 0.56 0.4 0.137 3 34.1875 121 34.1875 0 0.277 4 44.1 0 119.8 0 3.26 0 -99.00 0 313 801.0 3.3734 53.4 0.33 0.4 0.136 2 34.3112 121 34.3110 0 1.109 4 44.3 0 135.6 0 3.38 0 -99.00 0 312 998.3 2.9965 53.4 0.34 0.4 0.135 1 34.3737 121 34.3749 0 0.250 0 45.2 0 147.7 0 3.38 0 -99.00 0