*2014/11/20 09:54:17.29 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/06/02 16:28:14.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 16 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 31 46 2 Pressure decibar 2.2 201.4 3 Temperature:Primary 'deg C (ITS90)' 6.885 12.8408 4 Transmissivity %/metre 38.2 60.3 5 Oxygen:Dissolved:SBE mL/L 2.4 7.15 6 Fluorescence:URU:Seapoint mg/m^3 0.13 5.523 7 Bottle_Number n/a 1 16 8 Salinity:T0:C0 PSS-78 31.8411 33.9346 9 Number_of_bin_records n/a 118 121 10 Nitrate_plus_Nitrite umol/L 0 33.2 11 Flag:Nitrate_plus_Nitrite n/a 12 Silicate umol/L 0.2 49.1 13 Flag:Silicate n/a 14 Phosphate umol/L 0.3 2.37 15 Flag:Phosphate n/a 16 Chlorophyll:Extracted mg/m^3 0.5E-01 2.21 17 Flag:Chlorophyll:Extracted n/a 18 Dimethyl_Sulphide nmol/L 0 1.14 19 Flag:Dimethyl_Sulphide n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' ' ' F6.1 R4 ' ' 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' ' ' F6.1 R4 ' ' 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' ' ' F7.2 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F7.2 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' ' ' F7.2 R4 ' ' 19 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : P4 EVENT NUMBER : 7 LATITUDE : 48 38.98000 N ! (deg min) LONGITUDE : 126 39.96000 W ! (deg min) WATER DEPTH : 1300 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 333DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:50:56 1934 1934 CLEAN 4.7 2004/08/02 13:52:16 ? ? ADDSAMP 3.4 2004/08/04 17:31:57 1934 1934 BINAVE 4.0.1 2004/08/04 17:34:10 1934 16 MERGE 3.1 2004/08/05 08:47:51 16 16 MERGE 3.1 2004/08/05 08:56:18 16 16 CALIB 11.4 2004/08/13 14:37:12 16 16 CLEAN 4.7 2004/08/17 12:47:02 ? ? SORT 3.4.1 2004/08/17 12:49:25 16 16 REMOVECH 6.0 2004/08/17 12:53:52 16 16 HDREDIT2 2.2 2004/08/17 13:01:51 ? ? CALIB 11.4 2004/09/29 14:45:37 16 16 SORT 3.5 2004/11/03 15:51:05 16 16 MERGE 3.3 2004/11/03 15:51:50 16 16 SORT 3.5 2004/11/03 16:00:22 16 16 HDREDIT2 2.3 2004/12/07 14:37:09 ? ? REMOVECH 6.0 2005/02/04 11:29:31 16 16 CALIB 11.6 2005/10/12 13:52:11 16 16 CHANGE_FLAGS 1.0 2013/07/29 14:29:39 16 16 SORT 3.6 2013/10/28 15:59:38 16 16 MERGE 3.5 2013/10/28 16:00:00 16 16 SORT 3.6 2013/10/28 16:02:19 16 16 HDREDIT2 2.6 2013/10/28 16:02:30 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:14 16 16 CHANGE_FLAGS 2.0 2014/11/20 09:54:17 16 16 $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0007.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0007.sal -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0007.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0007.add -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:05 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2004/11/03 15:51:50 2004/11/03 15:51: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0007.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0007.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0007.mrg ------------------------------------------------ -The following MERGE parameters were used: 2004/11/03 14:59:15 2004/11/03 14:59: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0007.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0007.chl -SORT parameters: 2004/11/03 16:00:22 Sorted in ascending order of channel Pressure -HEADER EDITS: 2004/12/07 14:37:09 Applied edit header: H:\STNPCHEM\Work\HEADERS\Geographic Area.txt -The following CHANNEL(S) were removed from file. PAR -CALIB parameters: 2005/10/12 13:52:11 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 -SORT parameters: 2013/10/28 15:59:38 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2013/10/28 16:00:00 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Secondary Primary Channels to Include: ALL Secondary Channels to Include: Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\John Pages Archive\2004-10\DMS\2004-10-0007.srt_che Secondary file: P:\John Pages Archive\2004-10\DMS\2004-10-0007.ios -SORT parameters: 2013/10/28 16:02:19 Sorted in ascending order of channel Pressure -HEADER EDITS: 2013/10/28 16:02:30 Applied edit header: P:\John Pages Archive\DMS_Methods post 1999.txt $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. For DMS methods see file "Method post 1999 for Dimethylsulfide Analysis.docx" in directory \\OSD_Data_Archive\Cruise_Data\Documents\Analysis Reference Papers\. The minimum detectable level for DMS is 0.10 nM, so “0” values should be interpreted as <0.10. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0007.mrg ------------------------------------------------ Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0007.chl ------------------------------------------------ Sample_Number 38: chl seems very high, but so is CTD fluor Sample_Number 37: chl seems very high, but so is CTD fluor *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- ---6--- 7- ---8---- -9-- --10- - --12- - --14-- - --16-- - --18-- - !Samp Pressu Temperat Trans Oxygen Fluores Bo Salinity Numb Nitra F Silic F Phosph F Chloro F Dimeth F !le_ re ure: missi : cence: tt :T0:C0 er_o te_ l ate l ate l phyll: l yl_ l !Numb Primary vity Dissol URU: ~u ~bin plus_ ~ ~ ~ Extrac ~ Sulphi ~ !er ved: Seapoin mb _rec Nitri t t t ted e de d ! SBE t er ords te e e e d e !---- ------ -------- ----- ------ ------- -- -------- ---- ----- - ----- - ------ - ------ - ------ - *END OF HEADER 46 2.2 12.8408 45.0 6.77 0.280 16 31.8411 120 0.0 0 0.2 0 0.31 0 0.48 0 1.10 0 45 5.7 12.8385 46.5 6.77 0.281 15 31.8415 118 0.0 0 0.2 0 0.31 0 0.50 0 1.14 0 44 10.9 12.8340 48.2 6.76 0.349 14 31.8415 121 0.1 0 0.2 0 0.30 0 0.49 0 0.91 0 41 15.4 12.6293 47.4 6.88 0.670 11 31.8536 120 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.00 0 43 15.5 12.6222 47.2 6.87 0.663 13 31.8547 121 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.00 0 39 15.9 12.6025 46.9 6.88 0.700 9 31.8556 121 0.0 0 0.2 0 0.40 0 0.52 0 0.84 0 40 16.0 12.5936 46.8 6.87 0.675 10 31.8598 120 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.00 0 42 16.0 12.6223 47.3 6.87 0.654 12 31.8545 121 -99.0 0 -99.0 0 -99.00 0 -99.00 0 -99.00 0 38 20.7 11.4417 38.2 7.15 5.523 8 32.0675 121 0.4 0 1.4 0 0.50 0 2.21 0 0.53 6 37 26.6 10.6923 49.6 6.95 2.771 7 32.2123 120 2.5 0 5.5 0 0.65 0 1.38 0 0.25 0 36 31.3 10.2083 52.1 6.95 2.360 6 32.2583 121 3.1 0 5.6 0 0.67 0 0.74 0 0.11 0 35 41.8 9.2594 57.3 6.67 0.875 5 32.4082 121 5.6 0 7.4 0 0.83 0 0.41 0 0.14 0 34 50.4 9.0470 58.2 6.65 0.772 4 32.4478 121 6.9 0 8.5 0 0.89 0 0.36 0 0.00 0 33 100.8 7.6485 59.6 4.87 0.172 3 33.0578 121 19.4 0 22.6 0 1.56 0 0.05 0 0.00 0 32 176.1 7.0583 60.3 2.62 0.131 2 33.8913 121 31.6 0 45.2 0 2.27 0 -99.00 0 0.00 0 31 201.4 6.8850 60.3 2.40 0.130 1 33.9346 121 33.2 0 49.1 0 2.37 0 -99.00 0 0.00 0