*2024/04/15 14:55:03.32 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2004/06/16 15:14:43.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 11 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 545 555 2 Pressure decibar 5.4 122.9 3 Temperature:Primary 'deg C (ITS90)' 7.2191 10.7154 4 Transmissivity %/metre 15.6 58.1 5 Oxygen:Dissolved:SBE mL/L 3.2 8.71 6 PAR uE/m^2/sec 0.5 135.8 7 Fluorescence:URU:Seapoint mg/m^3 0.146 11.231 8 Bottle_Number n/a 1 11 9 Salinity:T0:C0 PSS-78 29.3025 32.9794 10 Number_of_bin_records n/a 116 121 11 Salinity:Bottle PSS-78 29.2161 32.9811 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 3.312 8.642 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 0.2 26.9 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 0.2 48.9 18 Flag:Silicate n/a 19 Phosphate umol/L 0.19 2.22 20 Flag:Phosphate n/a 21 Chlorophyll:Extracted mg/m^3 0.15 10.57 22 Flag:Chlorophyll:Extracted n/a 23 Carbon:Dissolved:Inorganic umol/kg 1747.69 2159.39 24 Flag:Carbon:Dissolved:Inorganic n/a 25 Alkalinity:Total umol/kg 1978.72 2208.29 26 Flag:Alkalinity:Total n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 3 I I 0 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 -99 ' ' 2 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 -99 ' ' 2 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 -99 ' ' 2 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 -99 ' ' 2 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 -99 ' ' 2 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 -99 ' ' 2 NQ C ' ' 23 -99 ' ' 8 F R4 2 24 -99 ' ' 3 NQ C ' ' 25 -99 ' ' 8 F R4 2 26 -99 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : SS7 EVENT NUMBER : 103 LATITUDE : 51 24.80000 N ! (deg min) LONGITUDE : 127 47.52000 W ! (deg min) WATER DEPTH : 123 ALTIMETER (M) : 5.19 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.add ------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:43 1331 1331 CLEAN 4.7 2004/08/02 13:53:26 ? ? ADDSAMP 3.4 2004/08/04 17:33:06 1331 1331 BINAVE 4.0.1 2004/08/04 17:34:44 1331 11 MERGE 3.1 2004/08/05 08:47:54 11 11 MERGE 3.1 2004/08/05 08:56:22 11 11 CALIB 11.4 2004/08/13 14:37:17 11 11 CLEAN 4.7 2004/08/17 12:47:08 ? ? SORT 3.4.1 2004/08/17 12:49:28 11 11 REMOVECH 6.0 2004/08/17 12:53:55 11 11 HDREDIT2 2.2 2004/08/17 13:01:54 ? ? CALIB 11.4 2004/09/29 14:45:49 11 11 SORT 3.5 2004/11/03 15:51:07 11 11 MERGE 3.3 2005/01/13 09:59:58 11 11 SORT 3.5 2005/01/13 10:04:07 11 11 CALIB 11.6 2005/10/12 13:52:24 11 11 SORT 3.5 2010/04/05 15:47:51 11 11 MERGE 3.3 2010/04/05 15:54:58 11 11 HDREDIT2 2.5.1 2010/04/05 15:59:50 ? ? SORT 3.5 2010/04/05 16:05:18 11 11 CHANGE_FLAGS 1.0 2013/07/16 11:47:42 11 11 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:16 11 11 CHANGE_FLAGS 2.0 2014/11/20 09:54:19 11 11 CLEAN 5.3 2024/04/15 14:49:34 11 11 CLEAN 5.3 2024/04/15 14:49:50 11 11 CLEAN 5.3 2024/04/15 14:52:38 11 11 HDREDIT2 3.2 2024/04/15 14:55:03 ? ? $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.add Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.add ------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank Channel 13: Oxygen:Dissolved [mL/L] (no changes) Channel 14: Flag:Oxygen:Dissolved [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:07 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2005/01/13 09:59:58 2005/01/13 09:59: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0103.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0103.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0103.mrg ------------------------------------------------ -The following MERGE parameters were used: 2005/01/13 09:55:16 2005/01/13 09:55: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0103.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0103.chl -SORT parameters: 2005/01/13 10:04:07 Sorted in ascending order of channel Pressure -CALIB parameters: 2005/10/12 13:52:24 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 -SORT parameters: 2010/04/05 15:47:51 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/04/05 15:54:57 2010/04/05 15:54:57 2010/04/05 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0103.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0103.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0103.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/04/05 15:47:19 Sorted in ascending order of channel Sample_Number -HEADER EDITS: 2010/04/05 15:59:50 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK.txt -SORT parameters: 2010/04/05 16:05:18 Sorted in ascending order of channel Pressure -CLEAN functions: 2024/04/15 14:49:32 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2024/04/15 14:49:49 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2024/04/15 14:52:35 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Insert Pad Values in Channel: Oxygen:Dissolved [mL/L] where channel Oxygen:Dissolved [mL/L] is in the range -99.99 to -99.99 0 data records in pad range. Set header Start and End times from the data. *FAILED* -HEADER EDITS: 2024/04/15 14:55:03 - none. $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0103.add ------------------------------------------------------- Oxygen flag d- lid was off the oxygen flask when I went to titrate it. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. Complete documentation on DIC and ALK sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- --6--- ---7--- 8- ---9---- -10- ---11--- - ---13-- - --15- - --17- - --19-- - --21-- - ---23-- 24 ---25-- 26 !Samp Pressu Temperat Trans Oxygen PAR Fluores Bo Salinity Numb Salinity F Oxygen: F Nitra F Silic F Phosph F Chloro F Carbon: Fl Alkalin Fl !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv l te_ l ate l ate l phyll: l Dissolv ag ity: ag !Numb Primary vity Dissol URU: ~u ~bin ~ ed ~ plus_ ~ ~ ~ Extrac ~ ed: ~g Total ~T !er ved: Seapoin mb _rec l e Nitri t t t ted e Inorgan an ot ! SBE t er ords e d te e e e d ic ic al !---- ------ -------- ----- ------ ------ ------- -- -------- ---- -------- - ------- - ----- - ----- - ------ - ------ - ------- -- ------- -- *END OF HEADER 555 5.4 10.7154 41.3 8.71 135.8 1.745 11 29.3025 121 29.2161 0 8.642 0 0.2 0 0.2 0 0.19 0 3.22 0 1747.69 0 1978.72 0 554 10.5 9.9442 15.6 6.45 22.5 11.231 10 30.1007 121 30.1987 0 6.318 0 5.0 0 5.9 0 0.81 0 10.57 0 1898.73 0 2039.07 0 553 20.7 8.5730 54.3 4.73 1.2 0.724 9 31.1943 121 31.2061 0 4.761 0 17.3 0 27.8 0 1.64 0 1.06 0 2017.10 0 2107.24 0 552 30.1 8.2252 54.6 4.39 0.7 0.766 8 31.4568 120 31.4719 0 4.406 4 20.7 0 33.7 0 1.83 0 1.00 0 2045.32 0 2113.95 0 551 50.8 7.9072 55.6 4.12 0.6 0.513 7 31.8181 120 31.8177 0 4.121 0 22.4 0 38.1 0 1.95 0 0.58 0 2072.71 0 2138.59 0 550 76.0 7.6572 58.1 3.80 0.5 0.154 6 32.3435 121 32.3572 0 3.814 0 24.8 0 41.1 0 2.07 0 0.17 0 2112.60 0 2182.92 0 549 100.5 7.3316 51.5 3.34 0.5 0.146 5 32.8489 121 32.8673 0 3.323 0 26.3 0 46.2 0 2.15 0 0.15 0 2149.69 0 2192.72 0 548 103.0 7.2994 54.5 3.30 0.5 0.148 4 32.8862 121 32.8862 0 3.312 0 26.5 0 46.6 0 2.17 0 -99.00 0 2153.13 0 2192.06 0 547 115.5 7.2248 51.5 3.20 0.5 0.148 3 32.9728 121 32.9766 0 3.357 0 26.9 0 48.7 0 2.22 0 -99.00 0 2159.38 0 2204.10 0 546 121.2 7.2191 51.3 3.20 0.5 0.146 2 32.9794 121 32.9811 0 3.584 0 26.6 0 48.9 0 2.22 0 -99.00 0 2158.07 0 2208.29 0 545 122.9 7.2191 48.9 3.20 0.5 0.150 1 32.9792 116 32.9682 0 3.643 0 26.6 0 48.5 0 2.22 0 -99.00 0 2159.39 0 2198.77 0