*2024/04/15 14:55:03.03 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2004/06/16 07:23:51.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 17 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 25 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 512 528 2 Pressure decibar 6 294.7 3 Temperature:Primary 'deg C (ITS90)' 5.596 12.5121 4 Transmissivity %/metre 36.3 60.4 5 Oxygen:Dissolved:SBE mL/L 1.76 6.96 6 Fluorescence:URU:Seapoint mg/m^3 0.127 4.867 7 Bottle_Number n/a 1 17 8 Salinity:T0:C0 PSS-78 31.5221 33.9487 9 Number_of_bin_records n/a 120 121 10 Salinity:Bottle PSS-78 31.6107 33.9514 11 Flag:Salinity:Bottle n/a 12 Oxygen:Dissolved mL/L 1.803 7.373 13 Flag:Oxygen:Dissolved n/a 14 Nitrate_plus_Nitrite umol/L 0 37.7 15 Flag:Nitrate_plus_Nitrite n/a 16 Silicate umol/L 0.2 72.5 17 Flag:Silicate n/a 18 Phosphate umol/L 0.36 2.75 19 Flag:Phosphate n/a 20 Chlorophyll:Extracted mg/m^3 0.4E-01 1.77 21 Flag:Chlorophyll:Extracted n/a 22 Carbon:Dissolved:Inorganic umol/kg 1912.09 2264.22 23 Flag:Carbon:Dissolved:Inorganic n/a 24 Alkalinity:Total umol/kg 2117.79 2270.96 25 Flag:Alkalinity:Total n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 -99 ' ' 2 NQ C ' ' 12 -99 ' ' 8 F ' ' 3 13 -99 ' ' 2 NQ C ' ' 14 -99 ' ' 6 F R4 1 15 -99 ' ' 2 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 -99 ' ' 2 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 -99 ' ' 2 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 -99 ' ' 2 NQ C ' ' 22 -99 ' ' 8 F R4 2 23 -99 ' ' 3 NQ C ' ' 24 -99 ' ' 8 F R4 2 25 -99 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-10 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E. Pacific STATION : SS3 EVENT NUMBER : 99 LATITUDE : 51 14.64000 N ! (deg min) LONGITUDE : 129 20.76000 W ! (deg min) WATER DEPTH : 297 ALTIMETER (M) : 4.2 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 498DR irradiance ' ' primary altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.add ------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/08/02 13:51:40 2057 2057 CLEAN 4.7 2004/08/02 13:53:21 ? ? ADDSAMP 3.4 2004/08/04 17:33:01 2057 2057 BINAVE 4.0.1 2004/08/04 17:34:42 2057 17 MERGE 3.1 2004/08/05 08:47:54 17 17 MERGE 3.1 2004/08/05 08:56:22 17 17 CALIB 11.4 2004/08/13 14:37:17 17 17 CLEAN 4.7 2004/08/17 12:47:08 ? ? SORT 3.4.1 2004/08/17 12:49:27 17 17 REMOVECH 6.0 2004/08/17 12:53:55 17 17 HDREDIT2 2.2 2004/08/17 13:01:54 ? ? CALIB 11.4 2004/09/29 14:45:48 17 17 SORT 3.5 2004/11/03 15:51:07 17 17 MERGE 3.3 2005/01/13 09:59:58 17 17 SORT 3.5 2005/01/13 10:04:07 17 17 REMOVECH 6.0 2005/02/04 11:29:32 17 17 CALIB 11.6 2005/10/12 13:52:23 17 17 SORT 3.5 2010/04/05 15:47:51 17 17 MERGE 3.3 2010/04/05 15:54:58 17 17 HDREDIT2 2.5.1 2010/04/05 15:59:50 ? ? SORT 3.5 2010/04/05 16:05:18 17 17 CHANGE_FLAGS 1.0 2013/07/16 11:47:42 17 17 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:30:15 17 17 CHANGE_FLAGS 2.0 2014/11/20 09:54:19 17 17 CLEAN 5.3 2024/04/15 14:49:34 17 17 CLEAN 5.3 2024/04/15 14:49:50 17 17 CLEAN 5.3 2024/04/15 14:52:38 17 17 HDREDIT2 3.2 2024/04/15 14:55:03 ? ? $END $REMARKS -CLEAN functions: Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-10\CTD files\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.samavg Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.mrg1 Secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.add Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.add ------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\CTD files\doc\2004-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.3310000E-01 0.1077200E+01 17 Salinity:T0:C0 PSS-78 10 0.1000000E-02 0.1000000E+01 -CLEAN functions: Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Altimeter Descent_Rate Salinity:T1:C1 Flag -HEADER EDITS: Applied edit header: O:\Data Processing\Header Comments\sal_oxy_chl_fresh_nut_a Channel 1: Sample_Number [n/a] Pad: -9 ==> -99 Channel 2: Pressure [decibar] Units ==> dbars Format: F10.3 ==> F7.1 Channel 3: Temperature:Primary [deg C (ITS90)] (no changes) Channel 4: Transmissivity [%/metre] (no changes) Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: Fluorescence:URU:Seapoint [mg/m^3] (no changes) Channel 8: Bottle_Number [n/a] (no changes) Channel 9: Salinity:T0:C0 [PSS-78] (no changes) Channel 10: Number_of_bin_records [n/a] Format: F5.0 ==> I5 Channel 11: Salinity:Bottle [] Units ==> PSS-78 Channel 12: Flag:Salinity:Bottle [] Units ==> n/a Pad: 0 ==> blank Channel 13: Oxygen:Dissolved [mL/L] (no changes) Channel 14: Flag:Oxygen:Dissolved [] Units ==> n/a Pad: 0 ==> blank -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-10\DOC new\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Salinity:T0:C0 PSS-78 10 0.5000000E-03 0.1000000E+01 -SORT parameters: 2004/11/03 15:51:07 Sorted in descending order of channel Sample_Number -The following MERGE parameters were used: 2005/01/13 09:59:58 Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0099.srt_che Secondary file: H:\Data Processing\2004\2004-10\2004-10-0099.mrg Comments from secondary file: H:\Data Processing\2004\2004-10\2004-10-0099.mrg ------------------------------------------------ -The following MERGE parameters were used: 2005/01/13 09:55:16 Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : H:\Data Processing\2004\2004-10\2004-10-0099.nut Secondary file: H:\Data Processing\2004\2004-10\2004-10-0099.chl -SORT parameters: 2005/01/13 10:04:07 Sorted in ascending order of channel Pressure -The following CHANNEL(S) were removed from file. PAR -CALIB parameters: 2005/10/12 13:52:23 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\repair shop\2004-10\2004-10-recal3.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1005000E+01 -SORT parameters: 2010/04/05 15:47:51 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/04/05 15:54:57 2010/04/05 15:54:57 2010/04/05 15:54: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0099.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0099.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-10\2004-10-0099.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/04/05 15:47:19 Sorted in ascending order of channel Sample_Number -HEADER EDITS: 2010/04/05 15:59:50 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK.txt -SORT parameters: 2010/04/05 16:05:18 Sorted in ascending order of channel Pressure -CLEAN functions: 2024/04/15 14:49:32 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2024/04/15 14:49:49 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2024/04/15 14:52:35 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Insert Pad Values in Channel: Oxygen:Dissolved [mL/L] where channel Oxygen:Dissolved [mL/L] is in the range -99.99 to -99.99 0 data records in pad range. Set header Start and End times from the data. *FAILED* -HEADER EDITS: 2024/04/15 14:55:03 - none. $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-10\CTD files\hydro\2004-10-0099.add ------------------------------------------------------- Oxygen flags- big bubbles in the oxygen flasks prior to titration. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. Complete documentation on DIC and ALK sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.331E-01 1.0772) Salinity:T0:C0 PSS-78 10 -99 () (0.1E-02 1) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-03 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.005) $END !-1-- --2--- ---3---- --4-- --5--- ---6--- 7- ---8---- -9-- ---10--- - ---12-- - --14- - --16- - --18-- - --20-- - ---22-- 23 ---24-- 25 !Samp Pressu Temperat Trans Oxygen Fluores Bo Salinity Numb Salinity F Oxygen: F Nitra F Silic F Phosph F Chloro F Carbon: Fl Alkalin Fl !le_ re ure: missi : cence: tt :T0:C0 er_o :Bottle l Dissolv l te_ l ate l ate l phyll: l Dissolv ag ity: ag !Numb Primary vity Dissol URU: ~u ~bin ~ ed ~ plus_ ~ ~ ~ Extrac ~ ed: ~g Total ~T !er ved: Seapoin mb _rec l e Nitri t t t ted e Inorgan an ot ! SBE t er ords e d te e e e d ic ic al !---- ------ -------- ----- ------ ------- -- -------- ---- -------- - ------- - ----- - ----- - ------ - ------ - ------- -- ------- -- *END OF HEADER 528 6.0 12.5121 36.3 3.68 3.002 17 31.5221 120 31.6107 0 7.112 0 0.0 0 0.2 0 0.37 0 1.57 0 1912.09 0 2138.55 0 527 11.0 12.2381 37.4 6.96 3.076 16 31.6146 121 31.6122 0 7.146 0 0.0 0 0.4 0 0.36 0 1.44 0 1914.98 0 2133.54 0 526 21.1 11.7496 37.6 6.92 4.867 15 31.6342 121 31.6337 0 7.373 0 0.0 0 2.0 0 0.42 0 1.77 0 1921.83 0 2117.79 0 525 30.9 10.9837 48.2 6.56 2.049 14 31.7620 120 31.7538 0 6.671 0 2.8 0 6.6 0 0.66 0 1.67 0 1949.59 0 2126.57 0 524 50.9 8.2224 59.9 5.56 0.238 13 32.2797 121 32.2878 0 5.674 0 14.3 0 20.7 0 1.36 0 0.21 0 2041.17 0 2152.40 0 523 76.1 7.3967 60.3 4.69 0.149 12 32.8518 121 32.8322 0 4.795 0 20.4 0 31.7 0 1.71 0 0.07 0 2101.28 0 2181.13 0 522 101.2 6.9645 60.3 3.87 0.134 11 33.2744 121 33.2709 0 3.880 0 25.8 0 39.8 0 2.00 0 0.04 0 2150.54 0 2212.22 0 521 125.0 6.7979 60.4 3.72 0.132 10 33.4697 121 33.4677 0 3.777 0 26.9 0 40.9 0 2.04 0 -99.00 0 2165.67 0 2246.45 0 520 151.6 6.3852 60.3 2.82 0.127 9 33.7701 121 33.7676 0 3.387 0 31.7 0 52.4 0 2.33 0 -99.00 0 2209.48 0 2243.42 0 519 175.8 6.1968 59.8 2.45 0.130 8 33.8296 121 33.8292 0 2.470 0 30.5 0 53.0 0 2.22 0 -99.00 0 2226.88 0 2251.37 0 518 201.2 5.9971 59.8 2.15 0.130 7 33.8975 121 33.8974 0 2.200 0 33.7 0 59.1 0 2.42 0 -99.00 0 2239.57 0 2251.13 0 517 226.4 5.8251 58.3 1.90 0.131 6 33.9288 121 33.9295 0 1.929 0 36.3 0 67.4 0 2.65 0 -99.00 0 2254.20 0 2258.88 0 516 251.1 5.6358 56.3 1.77 0.132 5 33.9478 121 33.9484 0 1.843 0 37.5 0 71.7 0 2.74 0 -99.00 0 2262.62 0 2266.92 0 515 276.7 5.6140 55.1 1.76 0.131 4 33.9487 121 33.9514 0 1.840 0 37.6 0 72.5 0 2.75 0 -99.00 0 2263.34 0 2269.66 0 514 287.2 5.6013 55.2 1.77 0.135 3 33.9477 121 33.9501 0 1.831 0 37.5 0 72.3 0 2.74 0 -99.00 0 2264.22 0 2268.88 0 513 291.1 5.6084 55.2 1.77 0.130 2 33.9478 121 33.9503 0 1.874 4 37.7 0 71.7 0 2.74 0 -99.00 0 2264.00 0 2270.96 0 512 294.7 5.5960 44.3 1.77 0.154 1 33.9459 121 33.9504 0 1.803 0 36.8 0 70.3 0 2.70 0 -99.00 0 2263.45 0 2264.60 0