*2014/11/20 09:54:12.06 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/02/24 13:07:55.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 15 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 152 175 2 Pressure decibar 1500.3 1502.2 3 Temperature:Secondary 'deg C (ITS90)' 2.3028 2.3046 4 Transmissivity %/metre 62.2 62.2 5 Fluorescence:URU:Seapoint mg/m^3 0.14 0.142 6 Oxygen:Dissolved:SBE mL/L 0.62 0.63 7 Bottle_Number n/a 1 24 8 Salinity:T1:C1 PSS-78 34.5063 34.5068 9 Number_of_bin_records n/a 97 121 10 Salinity:Bottle PSS-78 34.506 34.5117 11 Flag:Salinity:Bottle n/a 12 Carbon:Dissolved:Inorganic umol/kg 2385.27 2386.35 13 Flag:Carbon:Dissolved:Inorganic n/a 14 Alkalinity:Total umol/kg 2415.99 2419.86 15 Flag:Alkalinity:Total n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' ' ' F8.2 R4 ' ' 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' ' ' F8.2 R4 ' ' 15 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-05 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Gulf of Alaska STATION : P26 EVENT NUMBER : 44 LATITUDE : 50 2.00000 N ! (deg min) LONGITUDE : 144 57.78000 W ! (deg min) WATER DEPTH : 4213 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2710 conductivity:primary ' ' 2278 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 333DR altimeter: ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/03/29 09:55:37 2864 2864 CLEAN 4.5 2004/03/29 09:58:41 ? ? ADDSAMP 3.4 2004/03/30 11:45:35 2864 2864 BINAVE 4.0.1 2004/03/30 11:52:30 2864 24 MERGE 3.1 2004/03/30 11:56:17 24 24 MERGE 3.1 2004/03/31 13:52:34 24 24 MERGE 3.1 2004/03/31 13:52:40 24 24 MERGE 3.1 2004/03/31 13:53:35 24 24 CALIB 11.4 2004/03/31 13:58:13 24 24 CLEAN 4.5 2004/03/31 13:58:32 ? ? SORT 3.4.1 2004/03/31 13:58:47 24 24 REMOVECH 6.0 2004/03/31 13:58:55 24 24 HDREDIT2 1.9 2004/03/31 14:04:16 ? ? SORT 3.5 2010/02/21 15:15:38 24 24 MERGE 3.3 2010/02/21 15:19:47 24 24 HDREDIT2 2.5.1 2010/04/05 15:17:04 ? ? SORT 3.5 2010/04/05 15:22:32 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:47:37 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:29:46 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:54:12 24 24 $END $REMARKS CLEAN functions: - Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-05\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-05\hydro\2004-05-0044.samavg Secondary file: Q:\Cruise_Data\2004-05\hydro\2004-05-0044.sal -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-05\hydro\2004-05-0044.mrg1 Secondary file: Q:\Cruise_Data\2004-05\hydro\2004-05-0044.chl -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-05\hydro\2004-05-0044.mrg2 Secondary file: Q:\Cruise_Data\2004-05\hydro\2004-05-0044.add -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-05\hydro\2004-05-0044.mrg3 Secondary file: Q:\Cruise_Data\2004-05\hydro\2004-05-0044.nut1 -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-05\doc\2004-05-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 10 Oxygen:Dissolved:SBE mL/L 10 0.2910000E-01 0.1052600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Primary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Status:Pump Descent_Rate Salinity:T0:C0 Flag -SORT parameters: 2010/02/21 15:15:38 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/02/21 15:19:46 2010/02/21 15:19:46 2010/02/21 15:19: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-05\2004-05-0044.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-05\2004-05-0044.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-05\2004-05-0044.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/02/21 15:19:35 Sorted in ascending order of channel Sample_Number -HEADER EDITS: 2010/04/05 15:17:04 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-05\DIC_ALK.txt -SORT parameters: 2010/04/05 15:22:32 Sorted in ascending order of channel Pressure $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were collected in plastic test tubes and analyzed fresh on board by Wendy Richardson, using a Technicon AAII auto-analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Chlorophyll Template 2002 Turner Designs 10-AU-005-CE fluorometer, which has been calibrated (August 2002) with solutions of commercially prepared chlorophyll. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. Complete documentation on DIC and ALK sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise (meta tab) located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2004-05\2004-05-0044.iossrt --------------------------------------------------------------------------- Sample_Number 156: TIC: large difference between replicates Sample_Number 153: Alk: suspect calibration *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.291E-01 1.0526) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- 7- ---8---- -9-- ---10--- - ---12-- 13 ---14-- 15 !Samp Pressu Temperat Trans Fluores Oxygen Bo Salinity Numb Salinity F Carbon: Fl Alkalin Fl !le_ re ure: missi cence: : tt :T1:C1 er_o :Bottle l Dissolv ag ity: ag !Numb Secondar vity URU: Dissol ~u ~bin ~ ed: ~g Total ~T !er y Seapoin ved: mb _rec l Inorgan an ot ! t SBE er ords e ic ic al !---- ------ -------- ----- ------- ------ -- -------- ---- -------- - ------- -- ------- -- *END OF HEADER 158 1500.3 2.3046 62.2 0.140 0.62 7 34.5064 121 34.5075 0 -99.00 0 -99.00 0 153 1500.4 2.3046 62.2 0.140 0.62 2 34.5064 121 34.5060 0 2385.85 6 2415.99 3 173 1500.4 2.3036 62.2 0.140 0.62 22 34.5067 121 34.5076 0 -99.00 0 -99.00 0 159 1500.7 2.3046 62.2 0.141 0.62 8 34.5063 97 34.5117 0 -99.00 0 -99.00 0 174 1500.7 2.3034 62.2 0.140 0.63 23 34.5067 121 34.5075 0 -99.00 0 -99.00 0 154 1500.9 2.3041 62.2 0.140 0.62 3 34.5066 121 34.5062 0 2385.27 6 2419.38 0 157 1501.1 2.3039 62.2 0.141 0.63 6 34.5066 121 34.5076 0 -99.00 0 -99.00 0 161 1501.1 2.3038 62.2 0.141 0.62 10 34.5064 116 34.5079 0 -99.00 0 -99.00 0 169 1501.1 2.3042 62.2 0.141 0.62 18 34.5064 121 34.5074 0 -99.00 0 -99.00 0 170 1501.1 2.3036 62.2 0.141 0.63 19 34.5067 121 34.5075 0 -99.00 0 -99.00 0 163 1501.2 2.3036 62.2 0.141 0.63 12 34.5066 121 34.5070 0 -99.00 0 -99.00 0 165 1501.4 2.3036 62.2 0.142 0.62 14 34.5066 119 34.5071 0 -99.00 0 -99.00 0 171 1501.4 2.3031 62.2 0.141 0.62 20 34.5068 121 34.5079 0 -99.00 0 -99.00 0 168 1501.5 2.3038 62.2 0.140 0.63 17 34.5064 120 34.5078 0 -99.00 0 -99.00 0 155 1501.7 2.3037 62.2 0.141 0.62 4 34.5065 121 34.5065 0 2386.28 6 2419.23 0 156 1501.7 2.3037 62.2 0.141 0.63 5 34.5065 121 34.5077 0 2386.35 3 2418.88 0 167 1501.7 2.3032 62.2 0.140 0.63 16 34.5068 115 34.5072 0 -99.00 0 -99.00 0 162 1501.8 2.3036 62.2 0.140 0.62 11 34.5066 120 34.5079 0 -99.00 0 -99.00 0 152 1501.9 2.3041 62.2 0.140 0.62 1 34.5066 121 34.5074 0 2386.11 0 2419.86 0 160 1501.9 2.3035 62.2 0.142 0.62 9 34.5067 120 34.5087 0 -99.00 0 -99.00 0 164 1501.9 2.3036 62.2 0.141 0.62 13 34.5067 121 34.5065 0 -99.00 0 -99.00 0 166 1502.0 2.3034 62.2 0.140 0.63 15 34.5066 120 34.5077 0 -99.00 0 -99.00 0 175 1502.1 2.3028 62.2 0.140 0.62 24 34.5066 121 34.5090 0 -99.00 0 -99.00 0 172 1502.2 2.3029 62.2 0.140 0.63 21 34.5068 121 34.5073 0 -99.00 0 -99.00 0