*2014/11/20 09:54:10.56 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/03/06 16:25:43.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 17 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 21 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 286 302 2 Pressure decibar 2.343 262.825 3 Temperature:Secondary 'deg C (ITS90)' 7.2487 9.4941 4 Transmissivity %/metre 21.6 52.3 5 Fluorescence:URU:Seapoint mg/m^3 0.167 3.327 6 PAR uE/m^2/sec 0.54 271.99 7 PAR:Reference uE/m^2/sec 1006.923 1469.949 8 Oxygen:Dissolved:SBE mL/L 2.642706 7.177307 9 Salinity:T1:C1 PSS-78 26.8587 30.9767 10 Bottle_Number n/a 1 17 11 Number_of_bin_records n/a 72 120 12 Salinity:Bottle PSS-78 30.7991 30.9752 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.38 6.74 15 Flag:Chlorophyll:Extracted n/a 16 Nitrate_plus_Nitrite umol/L 22.8 30.2 17 Flag:Nitrate_plus_Nitrite n/a 18 Silicate umol/L 48.4 63 19 Flag:Silicate n/a 20 Phosphate umol/L 1.87 3.06 21 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 3 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-04 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Bio_Moorings SCIENTIST : Pena A. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI/Strait of Georgia STATION : BIO2 EVENT NUMBER : 51 LATITUDE : 49 0.41000 N ! (deg min) LONGITUDE : 123 23.11000 W ! (deg min) WATER DEPTH : 275 ALTIMETER (M) : 12.89 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2710 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 333DR altimeter: ' ' ' ' irradiance ' ' primary surface ' ' 'degrees = 0.0' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/03/26 09:25:06 1982 1982 CLEAN 4.5 2004/03/26 09:25:55 ? ? ADDSAMP 3.4 2004/05/07 15:07:22 1982 1982 BINAVE 4.0.1 2004/05/07 15:07:39 1982 17 MERGE 3.1 2004/05/07 15:29:44 17 17 MERGE 3.1 2004/05/13 17:03:25 17 17 MERGE 3.1 2004/05/13 17:03:37 17 17 MERGE 3.1 2004/05/13 17:03:44 17 17 CALIB 11.4 2004/05/13 17:27:16 17 17 CLEAN 4.6.1 2004/05/13 17:27:24 ? ? SORT 3.4.1 2004/05/13 17:27:34 17 17 REMOVECH 6.0 2004/05/13 17:27:40 17 17 HDREDIT2 2.0 2004/05/13 17:34:04 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:47:36 17 17 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:29:44 17 17 CHANGE_FLAGS 2.0 2014/11/20 09:54:10 17 17 $END $REMARKS CLEAN functions: - Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-04\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0051.samavg Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0051.mrg1 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.chl -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0051.mrg2 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.add -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0051.mrg3 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.nutsort Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.nutsort ------------------------------------------------- -The following SORT parameters were used. Sorted by channel: Sample_Number Pressure channel sorted according to values in sort channel -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-04\doc\2004-04-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.2910000E-01 0.1052600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Primary Conductivity:Primary Conductivity:Secondary Altimeter Oxygen:Voltage:SBE Status:Pump Descent_Rate Salinity:T0:C0 Flag $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.chl --------------------------------------------- Sample #302: Variability of duplicates >10% Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0051.nutsort ------------------------------------------------- Sample #297: There were two nutrient samples from this Niskin Bottle. The values from one bottle are given below. The values from the second sample were exactly the same. Sample #293: There were two nutrient samples from this Niskin Bottle. The values from one sample are given below. The values from the second sample were 27.9, 65.4 and 2.42 for NO3, Si and PO4 respectively. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were stored frozen and analysed at IOS. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.291E-01 1.0526) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7--- --8--- ---9---- 10 -11- ---12--- - --14-- - --16- - --18- - --20-- - !Samp Pressu Temperat Trans Fluores PAR PAR: Oxygen Salinity Bo Numb Salinity F Chloro F Nitra F Silic F Phosph F !le_ re ure: missi cence: Refere : :T1:C1 tt er_o :Bottle l phyll: l te_ l ate l ate l !Numb Secondar vity URU: nce Dissol ~u ~bin ~ Extrac ~ plus_ ~ ~ ~ !er y Seapoin ved: mb _rec l ted e Nitri t t t ! t SBE er ords e d te e e e !---- ------ -------- ----- ------- ------ ------ ------ -------- -- ---- -------- - ------ - ----- - ----- - ------ - *END OF HEADER 302 2.3 7.2487 28.5 2.330 272.0 1469.9 7.18 26.8587 17 119 -99.0000 0 5.91 3 22.8 0 48.8 0 1.87 0 301 5.7 7.3759 31.2 3.242 50.8 1264.6 7.17 27.0008 16 120 -99.0000 0 -99.00 0 -99.0 0 -99.0 0 -99.00 0 300 5.7 7.3980 31.2 3.327 53.1 1344.2 7.15 27.0175 15 94 -99.0000 0 6.36 0 22.8 0 48.6 0 1.89 0 299 10.5 7.4288 31.8 3.073 8.0 1238.0 7.12 27.1005 14 120 -99.0000 0 6.74 0 23.7 0 48.4 0 1.96 0 298 15.3 7.8615 41.6 2.179 2.3 1195.7 6.22 28.4212 13 114 -99.0000 0 -99.00 0 -99.0 0 -99.0 0 -99.00 0 297 15.3 7.8582 41.5 2.294 2.3 1195.4 6.24 28.4014 12 72 -99.0000 0 4.12 0 26.1 0 51.2 0 2.17 0 296 20.5 7.9230 46.0 1.265 1.2 1187.6 5.77 28.9017 11 119 -99.0000 0 1.75 0 27.9 0 53.2 0 2.34 0 295 25.5 7.9622 50.7 0.671 0.9 1415.0 5.45 29.2154 10 119 -99.0000 0 0.63 0 29.0 0 54.8 0 2.43 0 294 30.0 8.0083 52.3 0.459 0.7 1391.6 5.30 29.3947 9 120 -99.0000 0 0.38 0 29.2 0 54.5 0 2.46 0 293 50.7 7.9703 50.1 0.272 0.6 1426.6 5.34 29.7297 8 119 -99.0000 0 -99.00 0 28.7 0 53.1 0 2.42 0 292 75.4 7.8962 48.0 0.270 0.6 1283.0 5.43 29.9047 7 115 -99.0000 0 -99.00 0 28.6 0 53.0 0 2.33 0 291 100.8 7.9350 45.7 0.246 0.6 1186.2 5.35 30.0388 6 120 -99.0000 0 -99.00 0 28.2 0 52.4 0 2.41 0 290 125.5 8.3282 48.6 0.182 0.6 1220.5 4.71 30.2658 5 110 -99.0000 0 -99.00 0 29.3 0 55.5 0 2.54 0 289 150.9 8.7253 43.5 0.185 0.5 1260.7 4.04 30.4996 4 120 -99.0000 0 -99.00 0 29.5 0 57.5 0 2.64 0 288 175.7 9.0930 36.8 0.178 0.5 1181.6 3.36 30.7108 3 118 -99.0000 0 -99.00 0 30.1 0 60.6 0 2.80 0 287 200.7 9.2481 39.1 0.170 0.6 1006.9 3.13 30.7979 2 120 30.7991 0 -99.00 0 30.2 0 61.7 0 2.85 0 286 262.8 9.4941 21.6 0.167 0.5 1131.2 2.64 30.9767 1 114 30.9752 0 -99.00 0 29.7 0 63.0 0 3.06 0