*2014/11/20 09:54:09.96 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2004/03/03 14:58:01.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 23 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 23 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 105 127 2 Pressure decibar 2.205 521.159 3 Temperature:Secondary 'deg C (ITS90)' 4.9117 9.2671 4 Transmissivity %/metre 39.3 60.9 5 Fluorescence:URU:Seapoint mg/m^3 0.126 1.18 6 PAR uE/m^2/sec 0.54 24.123 7 PAR:Reference uE/m^2/sec 12.458 78.97 8 Oxygen:Dissolved:SBE mL/L 0.6964484 6.722584 9 Salinity:T1:C1 PSS-78 31.8592 34.1124 10 Bottle_Number n/a 1 23 11 Number_of_bin_records n/a 118 121 12 Salinity:Bottle PSS-78 33.8368 34.1095 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.1E-01 1.04 15 Flag:Chlorophyll:Extracted n/a 16 Oxygen:Dissolved mL/L 0.777 6.777 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 2.9 41.9 19 Flag:Nitrate_plus_Nitrite n/a 20 Silicate umol/L 3.6 88.4 21 Flag:Silicate n/a 22 Phosphate umol/L 0.62 2.98 23 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ------ ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 3 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 2 NQ C ' ' 16 -99.99 ' ' 8 F ' ' 3 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 2 NQ C ' ' 20 -99 ' ' 6 F R4 1 21 0 ' ' 2 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2004-04 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Bio_Moorings SCIENTIST : Pena A. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI/Strait of Georgia STATION : BIO1 EVENT NUMBER : 18 LATITUDE : 48 31.88000 N ! (deg min) LONGITUDE : 126 12.39000 W ! (deg min) WATER DEPTH : 290 ALTIMETER (M) : 11.7 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2710 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2095 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint Oxygen:SBE ' ' 0047 transmissometer:primary ' ' 333DR altimeter: ' ' ' ' irradiance ' ' primary surface ' ' 'degrees = 0.0' $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.30A Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.add --------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/03/26 09:24:51 2783 2783 CLEAN 4.5 2004/03/26 09:25:32 ? ? ADDSAMP 3.4 2004/04/13 13:48:28 2783 2783 BINAVE 4.0.1 2004/04/13 13:52:37 2783 23 MERGE 3.1 2004/05/07 15:29:43 23 23 MERGE 3.1 2004/05/13 17:03:24 23 23 MERGE 3.1 2004/05/13 17:03:36 23 23 MERGE 3.1 2004/05/13 17:03:43 23 23 CALIB 11.4 2004/05/13 17:27:15 23 23 CLEAN 4.6.1 2004/05/13 17:27:23 ? ? SORT 3.4.1 2004/05/13 17:27:33 23 23 REMOVECH 6.0 2004/05/13 17:27:39 23 23 HDREDIT2 2.0 2004/05/13 17:34:03 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:47:35 23 23 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:29:43 23 23 CHANGE_FLAGS 2.0 2014/11/20 09:54:09 23 23 $END $REMARKS CLEAN functions: - Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2004-04\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0018.samavg Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0018.mrg1 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.chl -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0018.mrg2 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.add Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.add --------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data\2004-04\hydro\2004-04-0018.mrg3 Secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.nutsort Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.nutsort ------------------------------------------------- -The following SORT parameters were used. Sorted by channel: Sample_Number Pressure channel sorted according to values in sort channel -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2004-04\doc\2004-04-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.2910000E-01 0.1052600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Primary Conductivity:Primary Conductivity:Secondary Altimeter Oxygen:Voltage:SBE Status:Pump Descent_Rate Salinity:T0:C0 Flag $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2004-04\hydro\2004-04-0018.chl --------------------------------------------- Sample #115: Variability of duplicates >10%. Sample #124: One replicate only. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples were stored frozen and analysed at IOS. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.291E-01 1.0526) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7--- --8--- ---9---- 10 -11- ---12--- - --14-- - ---16-- - --18- - --20- - --22-- - !Samp Pressu Temperat Trans Fluores PAR PAR: Oxygen Salinity Bo Numb Salinity F Chloro F Oxygen: F Nitra F Silic F Phosph F !le_ re ure: missi cence: Refere : :T1:C1 tt er_o :Bottle l phyll: l Dissolv l te_ l ate l ate l !Numb Secondar vity URU: nce Dissol ~u ~bin ~ Extrac ~ ed ~ plus_ ~ ~ ~ !er y Seapoin ved: mb _rec l ted e e Nitri t t t ! t SBE er ords e d d te e e e !---- ------ -------- ----- ------- ------ ------ ------ -------- -- ---- -------- - ------ - ------- - ----- - ----- - ------ - *END OF HEADER 121 2.2 9.2363 41.9 1.016 14.5 56.1 6.72 31.8592 17 121 -99.0000 0 0.87 0 6.777 0 2.9 0 5.1 0 0.62 0 127 2.2 9.2488 39.3 1.138 24.1 76.8 6.72 31.8666 23 119 -99.0000 0 -99.00 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 120 4.8 9.2347 49.2 1.061 5.5 49.8 6.72 31.8610 16 118 -99.0000 0 0.86 0 6.756 0 2.9 0 3.6 0 0.62 0 126 5.7 9.2446 46.9 1.033 10.4 79.0 6.71 31.8628 22 121 -99.0000 0 -99.00 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 119 10.1 9.2415 52.5 1.109 2.6 47.8 6.72 31.8650 15 121 -99.0000 0 1.00 0 6.768 0 2.9 0 4.3 0 0.62 0 125 12.5 9.2437 52.7 1.089 3.2 72.7 6.71 31.8685 21 120 -99.0000 0 -99.00 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 118 17.0 9.2671 54.4 1.115 2.0 45.7 6.65 32.0983 14 121 -99.0000 0 1.04 0 6.727 0 3.8 0 7.0 0 0.70 0 117 22.3 9.2447 55.0 1.180 1.6 47.8 6.62 32.1738 13 121 -99.0000 0 0.78 0 6.657 0 4.8 0 7.0 0 0.75 0 124 23.3 9.2424 55.5 1.118 1.9 70.6 6.61 32.1768 20 120 -99.0000 0 0.68 3 -99.990 0 -99.0 0 -99.0 0 -99.00 0 116 27.7 9.2245 56.2 0.985 1.3 51.9 6.58 32.1905 12 121 -99.0000 0 0.59 0 6.622 0 4.7 0 6.7 0 0.76 0 115 32.3 9.2238 56.9 0.870 1.1 47.8 6.55 32.1947 11 121 -99.0000 0 0.70 3 6.602 0 4.9 0 6.7 0 0.77 0 123 34.8 9.2241 56.6 0.927 1.2 74.7 6.58 32.1928 19 121 -99.0000 0 0.46 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 122 46.9 9.2191 58.7 0.549 0.8 68.5 6.48 32.2167 18 120 -99.0000 0 0.25 0 -99.990 0 -99.0 0 -99.0 0 -99.00 0 114 59.9 9.0956 59.0 0.264 0.6 49.8 5.72 32.4512 10 121 -99.0000 0 0.11 0 5.886 0 10.4 0 13.3 0 1.12 0 113 74.6 9.0346 58.2 0.180 0.6 41.5 4.96 32.7520 9 121 -99.0000 0 0.07 0 5.028 0 15.8 0 18.9 0 1.45 0 112 99.8 8.3201 59.2 0.148 0.6 35.3 4.15 33.1966 8 120 -99.0000 0 0.03 0 4.199 0 22.5 0 26.4 0 1.87 0 111 125.6 8.0476 59.2 0.136 0.6 34.8 3.46 33.4636 7 121 -99.0000 0 0.02 0 3.554 0 26.1 0 32.1 0 2.01 0 110 150.0 7.8322 58.8 0.130 0.6 33.2 2.93 33.6768 6 121 -99.0000 0 0.01 0 2.973 0 28.6 0 37.7 0 2.17 0 109 174.6 7.6941 58.2 0.129 0.6 33.2 2.65 33.7730 5 121 -99.0000 0 -99.00 0 2.728 0 30.1 0 40.7 0 2.25 0 108 201.7 7.6435 59.1 0.126 0.6 31.1 2.49 33.8333 4 121 33.8368 0 -99.00 0 2.553 0 31.1 0 42.1 0 2.24 0 107 250.7 7.2509 59.8 0.130 0.6 24.9 2.20 33.9353 3 121 33.9331 0 -99.00 0 2.285 0 32.9 0 47.3 0 2.41 0 106 299.9 6.8191 60.9 0.130 0.6 22.8 1.92 33.9861 2 121 33.9860 0 -99.00 0 2.039 0 34.8 0 53.5 0 2.50 0 105 521.2 4.9117 59.8 0.145 0.5 12.5 0.70 34.1124 1 121 34.1095 0 -99.00 0 0.777 0 41.9 0 88.4 0 2.98 0