*2014/11/20 09:54:05.35 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2003/10/06 17:28:38.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 5 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 200 204 2 Pressure decibar 1.668 60.482 3 Temperature:Primary 'deg C (ITS90)' 8.3319 13.2046 4 Transmissivity %/metre 23.7 55.8 5 Fluorescence:URU:Seapoint mg/m^3 0.107 6.628 6 Oxygen:Dissolved:SBE mL/L 1.368262 5.926929 7 Salinity:T0:C0 PSS-78 25.3254 32.7361 8 Bottle_Number n/a 1 5 9 Number_of_bin_records n/a 90 96 10 Oxygen:Dissolved mL/L 1.606 6.128 11 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 3 I I 0 9 ' ' ' ' 5 I I 0 10 -99 ' ' 8 F ' ' 3 11 0 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2003-33 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : LaPerouse,ECOHAB,Covariability,BIO-Moorings,... SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : West Coast Van.Is.\Juan de Fuca\Strait of Georgia STATION : EFF04 EVENT NUMBER : 36 LATITUDE : 49 3.11000 N ! (deg min) LONGITUDE : 125 8.58000 W ! (deg min) WATER DEPTH : 60 ALTIMETER (M) : 3.3 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 1764 pressure ' ' 77511 temperature:secondary ' ' 2106 conductivity:secondary ' ' 2102 Fluorometer ' ' Seapoint transmissometer:primary ' ' 333DR altimeter: ' ' ' ' Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.29B Comments from secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.dox1 -------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.7 2004/02/02 09:10:15 605 605 ADDSAMP 3.4 2004/02/02 15:18:33 605 605 BINAVE 4.0.1 2004/02/02 15:24:38 605 5 MERGE 3.1 2004/02/02 16:20:48 5 5 MERGE 3.1 2004/02/03 13:49:46 5 5 MERGE 3.1 2004/02/04 17:32:26 5 5 MERGE 3.1 2004/02/04 17:32:36 5 5 CALIB 11.3 2004/02/06 17:07:08 5 5 CLEAN 4.5 2004/02/09 13:09:18 ? ? SORT 3.4.1 2004/02/09 14:14:30 5 5 REMOVECH 6.0 2004/02/09 14:14:41 5 5 HDREDIT2 1.9 2004/02/09 14:14:56 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:29:29 5 5 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:29:13 5 5 CHANGE_FLAGS 2.0 2014/11/20 09:54:05 5 5 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data\2003-33\ctd\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.samavg Secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.sal -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.mrg1 Secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.chl1 -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.mrg2 Secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.dox1 Comments from secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.dox1 -------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.mrg3 Secondary file: Q:\Cruise_Data\2003-33\ctd\hydro\2003-33-0036.nut -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-33\DOC\2003-33-RECAL1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 10 Oxygen:Dissolved:SBE mL/L 10 -0.2890000E-01 0.1173100E+01 12 Salinity:T0:C0 PSS-78 10 -0.3000000E-02 0.1000000E+01 CLEAN functions: - Change Pad Value to -99 in Channel: Oxygen:Dissolved [mL/L] - Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Altimeter Salinity:T1:C1 Descent_Rate Status:Pump Flag $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.289E-01 1.1731) Salinity:T0:C0 PSS-78 10 -99 () (-0.3E-02 1) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- ---7---- 8- -9-- ---10-- - !Samp Pressu Temperat Trans Fluores Oxygen Salinity Bo Numb Oxygen: F !le_ re ure: missi cence: : :T0:C0 tt er_o Dissolv l !Numb Primary vity URU: Dissol ~u ~bin ed ~ !er Seapoin ved: mb _rec e ! t SBE er ords d !---- ------ -------- ----- ------- ------ -------- -- ---- ------- - *END OF HEADER 204 1.7 13.2046 23.7 6.628 5.93 25.3254 5 96 6.128 0 203 10.4 11.0203 43.6 3.421 3.88 31.7153 4 90 3.468 0 202 20.3 9.9239 55.8 0.248 2.86 32.0906 3 92 2.696 0 201 30.4 9.4934 54.2 0.142 2.58 32.3081 2 92 2.309 0 200 60.5 8.3319 50.7 0.107 1.37 32.7361 1 94 1.606 0