*2013/12/16 15:27:37.37 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2003/05/31 20:47:14.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 18 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 146 163 2 Pressure decibar 0 197.8 3 Temperature:Primary 'deg C (ITS90)' 5.7867 9.8362 4 Transmissivity %/metre 42.3 59.9 5 Fluorescence:URU:Seapoint mg/m^3 0.124 2.042 6 Oxygen:Dissolved:SBE mL/L 3.94 6.86 7 Bottle_Number n/a 1 18 8 Salinity:T0:C0 PSS-78 32.4064 33.7761 9 Number_of_bin_records n/a 74 121 10 Chlorophyll:Extracted mg/m^3 0.9E-01 0.62 11 Flag:Chlorophyll:Extracted n/a 12 Nitrate_plus_Nitrite umol/L 6 28 13 Flag:Nitrate_plus_Nitrite n/a 14 Silicate umol/L 7.2 42.9 15 Flag:Silicate n/a 16 Phosphate umol/L 0.85 2.02 17 Flag:Phosphate n/a 18 Dimethyl_Sulphide nmol/L 0 1.66 19 Flag:Dimethyl_Sulphide n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 7 F R4 2 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' ' ' F6.1 R4 ' ' 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' ' ' F6.1 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F7.2 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' ' ' F7.2 R4 ' ' 19 0 ' ' 2 NQ C ' ' $END $REMARKS Data quality is expressed with the following flags ---------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). ---------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2003-11 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : P16 EVENT NUMBER : 29 LATITUDE : 49 17.04000 N ! (deg min) LONGITUDE : 134 39.98000 W ! (deg min) WATER DEPTH : 3617 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 2102 pressure ' ' 75636 temperature:secondary ' ' 2710 conductivity:secondary ' ' 2278 Fluorometer ' ' Seapoint transmissometer:primary ' ' 333DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.27C $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.5 2003/08/14 13:53:25 2068 2068 ADDSAMP 3.4 2003/08/21 09:15:58 2068 2068 BINAVE 4.0.1 2003/08/21 09:17:03 2068 18 MERGE 3.0 2003/08/31 13:10:07 18 18 MERGE 3.0 2003/08/31 13:13:24 18 18 MERGE 3.0 2003/08/31 13:14:32 18 18 CALIB 11.2 2003/09/22 08:37:27 18 18 CLEAN 4.4 2003/09/22 11:05:06 ? ? REMOVECH 6.0 2003/09/22 11:10:59 18 18 HDREDIT2 1.7 2003/09/22 12:07:21 ? ? MERGE 3.1 2003/10/06 16:22:15 18 18 HDREDIT2 1.8 2003/10/08 13:52:42 ? ? REVERSE 2.0 2004/01/02 16:48:23 18 18 SORT 3.4.1 2004/04/23 11:53:46 18 18 CALIB 11.5 2005/10/07 10:41:12 18 18 CHANGE_FLAGS 1.0 2013/07/29 14:29:15 18 18 SORT 3.6 2013/10/28 14:44:11 18 18 MERGE 3.5 2013/10/28 14:46:20 18 18 SORT 3.6 2013/10/28 14:49:04 18 18 HDREDIT2 2.6 2013/10/28 14:49:17 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:27:37 18 18 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_data\2003-11\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0029.samavg Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0029.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0029.mrg1 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0029.chl -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0029.mrg2 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0029.add -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\doc\2003-11-0550-rcal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.3740000E-01 0.1138600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Descent_Rate Salinity:T1:C1 Flag -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : H:\Cruise_Data\2003-11\nuts\2003-11-0029.che Secondary file: H:\Cruise_Data\2003-11\nuts\2003-11-0029.rev -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\2003-11-recal4.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.9800000E+00 -SORT parameters: 2013/10/28 14:44:11 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2013/10/28 14:46:20 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Secondary Primary Channels to Include: ALL Secondary Channels to Include: Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\John Pages Archive\2003-11\DMS\2003-11-0029.srt_che Secondary file: P:\John Pages Archive\2003-11\DMS\2003-11-0029.ios -SORT parameters: 2013/10/28 14:49:04 Sorted in ascending order of channel Pressure -HEADER EDITS: 2013/10/28 14:49:17 Applied edit header: P:\John Pages Archive\DMS_Methods post 1999.txt $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0029.chl --------------------------------------------- Chlorophyll: Philippe Tortell and Nina Nemcek filtered and analyzed chl onboard Chlorophyll analyzed using Chemistry fluorometer calibrated Aug. '02. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. For DMS methods see file "Method post 1999 for Dimethylsulfide Analysis.docx" in directory \\OSD_Data_Archive\Cruise_Data\Documents\Analysis Reference Papers\. The minimum detectable level for DMS is 0.10 nM, so “0” values should be interpreted as <0.10. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.374E-01 1.1386) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 0.98) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- 7- ---8---- -9-- --10-- - --12- - --14- - --16-- - --18-- - !Samp Pressu Temperat Trans Fluores Oxygen Bo Salinity Numb Chloro F Nitra F Silic F Phosph F Dimeth F !le_ re ure: missi cence: : tt :T0:C0 er_o phyll: l te_ l ate l ate l yl_ l !Numb Primary vity URU: Dissol ~u ~bin Extrac ~ plus_ ~ ~ ~ Sulphi ~ !er Seapoin ved: mb _rec ted e Nitri t t t de d ! t SBE er ords d te e e e e !---- ------ -------- ----- ------- ------ -- -------- ---- ------ - ----- - ----- - ------ - ------ - *END OF HEADER 163 0.0 9.8362 42.3 0.292 6.74 18 32.4064 121 0.43 6.1 7.6 0.87 1.55 162 3.5 9.8297 47.5 0.398 6.74 17 32.4097 121 0.45 6.1 7.4 0.86 1.59 161 9.6 9.8034 51.9 0.370 6.75 16 32.4096 121 0.44 6.1 7.4 0.86 1.38 160 14.3 9.7637 51.9 0.548 6.75 15 32.4094 121 0.40 6.1 7.3 0.85 1.31 159 19.5 9.7357 51.8 0.720 6.75 14 32.4094 121 0.41 6.0 7.3 0.85 1.66 6 158 24.7 9.7016 51.6 0.823 6.77 13 32.4110 120 0.46 6.1 7.3 0.85 -99.00 157 25.2 9.6928 51.0 0.827 6.77 12 32.4116 103 0.43 6.0 7.4 0.85 1.08 6 156 29.4 9.5713 51.1 1.167 6.79 11 32.4181 121 0.50 6.2 7.4 0.85 0.77 155 34.9 9.4856 51.0 1.565 6.79 10 32.4239 121 0.55 6.2 7.2 0.85 0.69 154 38.2 9.4225 51.1 1.874 6.78 9 32.4266 120 -99.00 -99.0 -99.0 -99.00 -99.00 150 38.7 9.4087 51.1 1.970 6.79 5 32.4275 74 0.62 6.2 7.3 0.86 0.69 151 38.7 9.4104 51.1 1.929 6.79 6 32.4275 116 -99.00 -99.0 -99.0 -99.00 -99.00 152 38.8 9.4060 51.2 1.898 6.79 7 32.4278 120 -99.00 -99.0 -99.0 -99.00 -99.00 153 39.1 9.3812 51.2 1.907 6.79 8 32.4296 82 -99.00 -99.0 -99.0 -99.00 -99.00 149 49.5 8.4199 53.2 2.042 6.86 4 32.4310 120 0.52 7.4 7.6 0.93 0.52 148 99.7 6.2200 59.9 0.301 6.21 3 32.7725 121 0.09 16.7 16.6 1.45 0.00 147 175.0 5.7867 59.8 0.142 4.36 2 33.5770 121 -99.00 26.3 37.7 1.95 0.00 146 197.8 5.9570 59.9 0.124 3.94 1 33.7761 120 -99.00 28.0 42.9 2.02 0.00