*2013/12/16 15:27:37.22 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2003/05/29 05:43:41.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 19 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 34 52 2 Pressure decibar 2.2 1313 3 Temperature:Primary 'deg C (ITS90)' 2.743 11.9637 4 Transmissivity %/metre 46.2 60.5 5 Fluorescence:URU:Seapoint mg/m^3 0.128 1.733 6 Oxygen:Dissolved:SBE mL/L 0.294 6.7032 7 Bottle_Number n/a 1 19 8 Salinity:T0:C0 PSS-78 31.8154 34.4914 9 Number_of_bin_records n/a 119 121 10 Salinity:Bottle PSS-78 31.8152 34.4913 11 Flag:Salinity:Bottle n/a 12 Nitrate_plus_Nitrite umol/L 0 44.9 13 Flag:Nitrate_plus_Nitrite n/a 14 Silicate umol/L 2.3 154.5 15 Flag:Silicate n/a 16 Phosphate umol/L 0.41 3.24 17 Flag:Phosphate n/a 18 Oxygen:Dissolved mL/L 0.243 6.742 19 Flag:Oxygen:Dissolved newunits $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -9 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 0 ' ' 2 NQ C ' ' 12 -99 ' ' ' ' F6.1 R4 ' ' 13 0 ' ' 2 NQ C ' ' 14 -99 ' ' ' ' F6.1 R4 ' ' 15 0 ' ' 2 NQ C ' ' 16 -99 ' ' ' ' F7.2 R4 ' ' 17 0 ' ' 2 NQ C ' ' 18 -99 ' ' 8 F ' ' 3 19 0 ' ' 2 NQ C ' ' $END $REMARKS Data quality is expressed with the following flags ---------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). ---------------------------------------------------------------------------- Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.clnadd ---------------------------------------------------------- Raw data in file oxydata\2003-11-\2003-11-0008.o2 VIO3 = 10.02 ! Volume of iodate standard (cm**) NIO3 = .01013204 ! Normality of iodate standard VREG = 2.0 ! Volume of sample displaced by reagents (cm**3) DOREG = 0.0017 ! Absolute amount of O2 added with reagents (ml) $END *ADMINISTRATION MISSION : 2003-11 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : P4 EVENT NUMBER : 8 LATITUDE : 48 39.01000 N ! (deg min) LONGITUDE : 126 39.97000 W ! (deg min) WATER DEPTH : 1318 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2106 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint irradiance ' ' primary transmissometer:primary ' ' 333DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.27C Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.add --------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.clnadd ---------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.5 2003/08/14 13:53:05 2299 2299 ADDSAMP 3.4 2003/08/21 09:15:46 2299 2299 BINAVE 4.0.1 2003/08/21 09:16:57 2299 19 MERGE 3.0 2003/08/31 13:10:07 19 19 MERGE 3.0 2003/08/31 13:13:23 19 19 MERGE 3.0 2003/08/31 13:14:31 19 19 CALIB 11.2 2003/09/20 18:10:15 19 19 CALIB 11.2 2003/09/22 09:06:38 19 19 CLEAN 4.4 2003/09/22 11:05:05 ? ? REMOVECH 6.0 2003/09/22 11:10:59 19 19 HDREDIT2 1.7 2003/09/22 12:07:21 ? ? CALIB 11.2 2003/09/30 17:13:47 19 19 MERGE 3.1 2003/10/06 16:22:14 19 19 HDREDIT2 1.8 2003/10/08 13:52:42 ? ? REVERSE 2.0 2004/01/02 16:48:12 19 19 SORT 3.4.1 2004/04/23 11:53:34 19 19 REMOVECH 7.0 2005/09/19 14:41:42 19 19 SORT 3.5 2005/09/19 14:42:08 19 19 MERGE 3.3 2005/09/19 15:55:02 19 19 SORT 3.5 2005/09/19 16:07:28 19 19 CALIB 11.5 2005/10/07 10:41:11 19 19 CHANGE_FLAGS 1.0 2013/07/16 11:47:16 19 19 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:27:37 19 19 $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_data\2003-11\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0008.samavg Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.sal -MERGE *** Secondary file not found *** Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0008.mrg1 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.chl -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0008.mrg2 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.add Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.add --------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Salinity is computed Calibration file = Q:\Cruise_Data\2003-11\doc\2003-11-0585-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 4 Temperature:Primary deg C (IT 10 -0.2700000E-02 0.1000000E+01 Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Salinity:T0:C0 PSS-78 130 Pressure Temperature:Primary Conductivity:Primary -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\doc\2003-11-0550-rcal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.3740000E-01 0.1138600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Descent_Rate Salinity:T1:C1 Flag -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\doc\2003-11-0585-rcal-spec.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T0:C0 PSS-78 10 0.4400000E-02 0.1000000E+01 -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : H:\Cruise_Data\2003-11\nuts\2003-11-0008.che Secondary file: H:\Cruise_Data\2003-11\nuts\2003-11-0008.rev -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -REMOVECH 2005/09/19 14:41:42 The following CHANNEL(S) were removed: Oxygen:Dissolved [mL/L] Flag:Oxygen:Dissolved -SORT parameters: 2005/09/19 14:42:08 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2005/09/19 15:55:02 Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.srtrem Secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.clnadd Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.clnadd ---------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following OXYCALC parameters were used Blank = 0.005 Sodium Thiosulfate concentration = 0.729 Volume of iodate standard (cm**3) = 10.02 Enter Normalitity of iodate standard = 0.01013000 -CLEAN functions: 2005/09/19 15:49:21 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. -SORT parameters: 2005/09/19 16:07:28 Sorted in ascending order of channel Pressure -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\2003-11-recal4.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.9800000E+00 $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0008.sal --------------------------------------------- Sample # 41 - Cap loose Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0008.clnadd ---------------------------------------------------------- This cast was run through the DOXX program for calculating dissolved oxygen values. The standard values defaulted to an incorrect number; should be 0.729. *CALIBRATION $TABLE: CALCULATED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 130 -99 (Pressure Temperature:Primary Conductivity:Primary) () $END $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.27E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.374E-01 1.1386) Salinity:T0:C0 PSS-78 10 -99 () (0.44E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 0.98) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- 7- ---8---- -9-- ---10--- - --12- - --14- - --16-- - ---18-- - !Samp Pressu Temperat Trans Fluores Oxygen Bo Salinity Numb Salinity F Nitra F Silic F Phosph F Oxygen: F !le_ re ure: missi cence: : tt :T0:C0 er_o :Bottle l te_ l ate l ate l Dissolv l !Numb Primary vity URU: Dissol ~u ~bin ~ plus_ ~ ~ ~ ed ~ !er Seapoin ved: mb _rec l Nitri t t t e ! t SBE er ords e te e e e d !---- ------ -------- ----- ------- ------ -- -------- ---- -------- - ----- - ----- - ------ - ------- - *END OF HEADER 52 2.2 11.9637 46.2 1.245 6.56 19 31.8247 121 31.8240 0.0 2.4 0.41 6.610 51 10.6 11.7372 47.8 1.733 6.60 18 31.8154 120 31.8152 0.0 2.3 0.41 6.603 50 24.5 9.5625 54.5 1.007 6.70 17 32.2533 121 32.2415 4.3 6.2 0.80 6.742 49 48.8 8.8855 57.2 0.603 6.32 16 32.3357 121 32.3333 7.2 6.7 0.96 6.391 48 74.7 7.4468 59.2 0.212 5.55 15 32.6965 121 32.6951 16.1 16.8 1.46 5.621 47 99.9 6.9881 58.9 0.143 4.56 14 33.1594 121 33.1305 22.6 26.6 1.81 4.650 46 124.8 6.8119 58.7 0.130 3.95 13 33.4792 121 33.4787 25.7 33.2 1.96 3.972 45 150.4 6.9629 59.0 0.129 3.05 12 33.7791 121 33.7726 29.4 40.6 2.15 3.049 44 174.5 7.0366 59.4 0.130 2.43 11 33.9011 120 33.8989 32.0 45.5 2.30 2.472 43 199.4 6.8332 59.6 0.142 2.16 10 33.9567 120 33.9554 33.6 50.3 2.41 2.158 42 249.4 6.3110 59.8 0.128 1.72 9 33.9925 121 33.9917 36.3 58.3 2.60 1.711 41 299.2 5.8472 60.0 0.132 1.47 8 34.0037 119 34.0037 4 38.1 65.3 2.72 1.572 40 398.6 5.1385 60.3 0.131 1.10 7 34.0346 121 34.0340 40.3 77.4 2.91 1.157 39 600.6 4.3986 60.5 0.133 0.44 6 34.1763 121 34.1755 43.5 100.4 3.15 0.431 37 799.9 3.7035 60.4 0.135 0.29 4 34.2994 121 34.2994 44.6 122.8 3.23 0.274 38 800.0 3.7031 60.4 0.134 0.29 5 34.2994 121 34.2981 44.4 122.3 3.22 0.243 36 1000.0 3.3613 60.3 0.137 0.33 3 34.3972 120 34.3969 44.9 135.5 3.24 0.311 35 1249.1 2.9322 59.7 0.134 0.50 2 34.4660 121 34.4658 44.4 149.3 3.22 0.482 34 1313.0 2.7430 59.5 0.133 0.61 1 34.4914 121 34.4913 44.2 154.5 3.21 0.594