*2024/04/15 14:27:50.01 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2003/06/13 10:23:35.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 17 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 21 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 460 476 2 Pressure decibar 0.3 999.3 3 Temperature:Primary 'deg C (ITS90)' 3.3411 11.4381 4 Transmissivity %/metre 31.8 59.5 5 Fluorescence:URU:Seapoint mg/m^3 0.123 1.748 6 Oxygen:Dissolved:SBE mL/L 0.31 6.43 7 Bottle_Number n/a 1 17 8 Salinity:T0:C0 PSS-78 31.2439 34.3483 9 Number_of_bin_records n/a 89 121 10 Salinity:Bottle PSS-78 31.2483 34.3486 11 Flag:Salinity:Bottle n/a 12 Chlorophyll:Extracted mg/m^3 0.3E-01 1.73 13 Flag:Chlorophyll:Extracted n/a 14 Nitrate_plus_Nitrite umol/L 0.9 44.6 15 Flag:Nitrate_plus_Nitrite n/a 16 Silicate umol/L 5.7 135.2 17 Flag:Silicate n/a 18 Phosphate umol/L 0.5 3.25 19 Flag:Phosphate n/a 20 Oxygen:Dissolved mL/L 0.426 6.439 21 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 3 I I 0 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 5 I I 0 10 -99 ' ' 9 F R4 4 11 -99 ' ' 2 NQ C ' ' 12 -99 ' ' 7 F R4 2 13 -99 ' ' 2 NQ C ' ' 14 -99 ' ' 6 F R4 1 15 -99 ' ' 2 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 -99 ' ' 2 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 -99 ' ' 2 NQ C ' ' 20 -99 ' ' 8 F ' ' 3 21 -99 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.clnadd -------------------------------------------------------------------------------------- Raw data in file oxydata\2003-11-\2003-11-0079.o2 VIO3 = 10.02 ! Volume of iodate standard (cm**) NIO3 = .01013204 ! Normality of iodate standard VREG = 2.0 ! Volume of sample displaced by reagents (cm**3) DOREG = 0.0017 ! Absolute amount of O2 added with reagents (ml) $END *ADMINISTRATION MISSION : 2003-11 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : N.E.Pacific STATION : SHELF EVENT NUMBER : 79 LATITUDE : 51 0.02000 N ! (deg min) LONGITUDE : 129 55.05000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2095 conductivity:primary ' ' 2102 pressure ' ' 75636 temperature:secondary ' ' 2710 conductivity:secondary ' ' 2278 Fluorometer ' ' Seapoint transmissometer:primary ' ' 333DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.27C Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.add --------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.clnadd ---------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.5 2003/08/14 13:53:47 2024 2024 ADDSAMP 3.4 2003/08/21 09:16:32 2024 2024 BINAVE 4.0.1 2003/08/21 09:17:19 2024 17 MERGE 3.0 2003/08/31 13:10:08 17 17 MERGE 3.0 2003/08/31 13:13:25 17 17 MERGE 3.0 2003/08/31 13:14:33 17 17 CALIB 11.2 2003/09/22 08:37:28 17 17 CLEAN 4.4 2003/09/22 11:05:07 ? ? REMOVECH 6.0 2003/09/22 11:11:00 17 17 HDREDIT2 1.7 2003/09/22 12:07:22 ? ? MERGE 3.1 2003/10/06 16:22:16 17 17 HDREDIT2 1.8 2003/10/08 13:52:43 ? ? REVERSE 2.0 2004/01/02 16:48:53 17 17 SORT 3.4.1 2004/04/23 11:54:50 17 17 REMOVECH 7.0 2005/09/19 14:41:42 17 17 SORT 3.5 2005/09/19 14:42:09 17 17 MERGE 3.3 2005/09/19 15:55:03 17 17 SORT 3.5 2005/09/19 16:07:29 17 17 CALIB 11.5 2005/10/07 10:41:13 17 17 CHANGE_FLAGS 1.0 2013/07/16 11:47:17 17 17 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:27:37 17 17 HDREDIT2 2.6 2013/12/18 14:33:30 ? ? CHANGE_FLAGS 2.0 2014/11/20 09:53:48 17 17 CLEAN 5.3 2024/04/15 14:23:31 17 17 CLEAN 5.3 2024/04/15 14:27:15 17 17 HDREDIT2 3.2 2024/04/15 14:27:50 ? ? $END $REMARKS -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_data\2003-11\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0079.samavg Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0079.mrg1 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.chl -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : Q:\Cruise_Data\2003-11\hydro\2003-11-0079.mrg2 Secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.add Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.add --------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\doc\2003-11-0550-rcal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 -0.3740000E-01 0.1138600E+01 CLEAN functions: - Remove Sea-Bird comments from the header. -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Oxygen:Voltage:SBE Descent_Rate Salinity:T1:C1 Flag -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : H:\Cruise_Data\2003-11\nuts\2003-11-0079.che Secondary file: H:\Cruise_Data\2003-11\nuts\2003-11-0079.rev -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel -REMOVECH 2005/09/19 14:41:42 The following CHANNEL(S) were removed: Oxygen:Dissolved [mL/L] Flag:Oxygen:Dissolved -SORT parameters: 2005/09/19 14:42:09 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2005/09/19 15:55:02 2005/09/19 15:55:02 2005/09/19 15:55: Merge Channel: Sample_Number Merge Scheme Used: Interweave Records from Both Files Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Dissolved, Flag:Oxygen:Dissolved Primary file : H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.srtrem Secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.clnadd Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.clnadd ---------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following OXYCALC parameters were used Blank = 0.005 Sodium Thiosulfate concentration = 0.729 Volume of iodate standard (cm**3) = 10.02 Enter Normalitity of iodate standard = 0.01013000 -REMOVECH 2005/08/31 11:08:13 The following CHANNEL(S) were removed: Dissolved_oxygen:volume [mL/L] -CLEAN functions: 2005/09/19 15:49:21 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. -SORT parameters: 2005/09/19 16:07:29 Sorted in ascending order of channel Pressure -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data\2003-11\2003-11-recal4.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.9800000E+00 -HEADER EDITS: 2013/12/18 14:33:30 Channel 21: Flag:Oxygen:Dissolved [n/a] Units: newunits ==> n/a -CLEAN functions: 2024/04/15 14:23:30 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -CLEAN functions: 2024/04/15 14:27:14 20 Reset #RECS, MIN & MAX values in header. Change Pad Value to -99 in All Channels. Set header Start and End times from the data. *FAILED* -HEADER EDITS: 2024/04/15 14:27:50 - none. $END *COMMENTS Comments from secondary file: Q:\Cruise_Data\2003-11\hydro\2003-11-0079.chl --------------------------------------------- Chlorophyll: Philippe Tortell and Nina Nemcek filtered and analyzed chl onboard Chlorophyll analyzed using Chemistry fluorometer calibrated Aug. '02. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. Comments from secondary file: H:\Data Processing\Oxygen redo\2003-11\2003-11-0079.clnadd ---------------------------------------------------------- This cast was run through the DOXX program for calculating dissolved oxygen values. The standard values defaulted to an incorrect number; should be 0.729. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.374E-01 1.1386) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 0.98) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- 7- ---8---- -9-- ---10--- - --12-- - --14- - --16- - --18-- - ---20-- - !Samp Pressu Temperat Trans Fluores Oxygen Bo Salinity Numb Salinity F Chloro F Nitra F Silic F Phosph F Oxygen: F !le_ re ure: missi cence: : tt :T0:C0 er_o :Bottle l phyll: l te_ l ate l ate l Dissolv l !Numb Primary vity URU: Dissol ~u ~bin ~ Extrac ~ plus_ ~ ~ ~ ed ~ !er Seapoin ved: mb _rec l ted e Nitri t t t e ! t SBE er ords e d te e e e d !---- ------ -------- ----- ------- ------ -- -------- ---- -------- - ------ - ----- - ----- - ------ - ------- - *END OF HEADER 476 0.3 11.4381 31.8 1.742 6.43 17 31.2439 121 31.2483 0 1.73 0 0.9 0 5.7 0 0.50 0 6.424 0 475 9.9 11.4290 42.0 1.748 6.41 16 31.2463 121 31.2489 0 1.29 0 0.9 0 5.9 0 0.51 0 6.439 0 474 23.9 11.3265 42.5 1.672 6.36 15 31.2601 121 31.2598 0 1.58 0 1.2 0 6.2 0 0.52 0 6.414 0 473 48.0 9.1309 55.7 0.263 5.64 14 31.6526 121 31.6530 0 0.17 0 10.5 0 17.4 0 1.27 0 5.712 0 472 74.5 8.5210 57.5 0.247 5.72 13 32.1263 121 32.1488 0 0.09 0 12.4 0 16.8 0 1.25 0 5.810 0 471 101.8 7.3706 57.5 0.162 4.45 12 32.8515 121 32.8342 0 0.03 0 20.9 0 32.8 0 1.76 0 4.543 0 470 125.6 6.8298 57.9 0.123 3.40 11 33.3575 121 33.3332 0 -99.00 0 27.0 0 46.9 3 2.12 0 3.537 0 469 150.8 6.6214 58.0 0.123 2.95 10 33.6286 121 33.6242 0 -99.00 0 30.2 0 45.8 3 2.26 0 2.990 0 468 177.2 6.3388 58.0 0.130 2.53 9 33.7621 121 33.7606 0 -99.00 0 32.4 0 52.5 0 2.40 0 2.548 0 467 196.5 6.0982 57.8 0.124 2.58 8 33.8465 121 33.8461 0 -99.00 0 32.7 0 53.0 0 2.38 0 2.669 0 466 248.3 5.9899 58.3 0.126 1.92 7 33.9447 121 33.9467 0 -99.00 0 35.8 0 60.6 0 2.60 0 1.959 0 465 298.9 5.3526 58.9 0.123 1.71 6 33.9530 121 33.9547 0 -99.00 0 37.8 0 69.0 0 2.72 0 1.730 0 463 400.6 4.8921 59.3 0.125 1.07 4 34.0350 89 34.0365 0 -99.00 0 40.8 0 83.6 0 2.97 0 1.117 0 464 402.8 4.8885 59.2 0.124 1.07 5 34.0353 120 34.0363 0 -99.00 0 40.8 0 82.8 0 2.96 0 1.077 0 462 599.0 4.3218 59.5 0.125 0.53 3 34.1501 121 34.1510 0 -99.00 0 43.1 0 102.1 0 3.14 0 0.563 0 461 800.9 3.7589 59.2 0.128 0.37 2 34.2508 121 34.2519 0 -99.00 0 44.3 0 120.1 0 3.21 0 0.426 0 460 999.3 3.3411 59.4 0.128 0.31 1 34.3483 121 34.3486 0 -99.00 0 44.6 0 135.2 0 3.25 0 0.438 0