*2014/11/20 09:53:31.78 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2002/09/01 23:53:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 17 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 12 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 619 635 2 Pressure decibar 1 593.8 3 Temperature:Primary 'deg C (ITS90)' 8.7571 17.0128 4 Transmissivity %/metre 39.7 56.3 5 Fluorescence:URU:Seapoint mg/m^3 0.81E-01 2.963 6 Oxygen:Dissolved:SBE mL/L 2.176 6.34 7 Salinity:T0:C0 PSS-78 26.1254 31.118 8 Bottle_Number n/a 1 17 9 Oxygen:Dissolved mL/L 2.151 6.471 10 Flag:Oxygen:Dissolved n/a 11 Salinity:Bottle PSS-78 31.064 31.1192 12 Flag:Salinity:Bottle n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I ' ' 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 3 I I ' ' 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 2 NQ C ' ' 11 -99 ' ' ' ' f9.4 R4 ' ' 12 -99 ' ' 2 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2002-28 AGENCY : IOS, Ocean Science and Productivity, Sidney, BC COUNTRY : Canada PROJECT : BC Inlets SCIENTIST : Stucchi D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : BC Inlets STATION : JE2 EVENT NUMBER : 50 LATITUDE : 49 46.32000 N ! (deg min) LONGITUDE : 124 9.27000 W ! (deg min) WATER DEPTH : 600 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 2023 conductivity:primary ' ' 1763 pressure ' ' 77511 temperature:secondary ' ' 2106 conductivity:secondary ' ' 1764 Fluorometer ' ' Seapoint transmissometer:primary ' ' 333DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V 5.26C Comments from secondary file: D:\Data\2002\2002-28\2002-28-0050.dox ------------------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 2.2 2002/12/12 15:10:36 2057 2057 BINAVE 4.0.1 2002/12/16 13:03:02 2057 17 CALIB 10.4 2003/01/16 12:14:14 17 17 REMOVECH 6.0 2003/01/16 12:14:52 17 17 REORDER 1.2.1 2003/01/16 12:15:20 ? ? ADDSAMP 3.2 2003/01/27 13:42:21 17 17 MERGE 2.8 2003/01/27 14:09:21 17 17 ADDCHANS 1.0 2003/01/27 14:18:33 ? ? CLEAN 4.1 2003/01/27 14:18:58 17 17 MERGE 2.8 2003/01/27 14:38:38 17 17 ADDCHANS 1.0 2003/01/27 14:48:03 ? ? MERGE 2.8 2003/01/27 15:57:09 17 17 MERGE 2.8 2003/01/27 16:57:14 17 17 HDREDIT2 1.51 2003/01/31 14:04:12 ? ? CLEAN 4.1 2003/01/31 14:06:36 17 17 CALIB 11.1 2003/08/12 16:18:28 17 17 SORT 3.4.1 2004/04/14 16:36:28 17 17 CHANGE_FLAGS 1.0 2013/07/29 14:29:00 17 17 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:26:37 17 17 CHANGE_FLAGS 2.0 2014/11/20 09:53:31 17 17 $END $REMARKS -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.0 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\CTD\2002-28\2002-28_rcal.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Oxygen:Dissolved:SBE mL/L 10 0.9300000E-01 0.1000000E+01 -The following CHANNEL(S) were removed from file. Scan_Number Temperature:Secondary Conductivity:Primary Conductivity:Secondary Salinity:T1:C1 Flag -The following ADDSAMP parameters were used: Sample Number Lookup File: D:\Data\2002\2002-28\numbers.csv Bottle Channel Name: Bottle_Number -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Transmissivity, Fluorescence:URU:Seapoint, Oxygen:Dissolved:SBE, Salinity:T0:C0, Bottle_Number Secondary Channels to Include: Oxygen:Dissolved Primary file : D:\Data\2002\2002-28\2002-28-0050.sam Secondary file: D:\Data\2002\2002-28\2002-28-0050.dox Comments from secondary file: D:\Data\2002\2002-28\2002-28-0050.dox ------------------------------------------------------------------- ***Edited by DJS to remove appended Je 1 data*** C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' -The following OXYCALC parameters were used Blank = 0.004 Sodium Thiosulfate concentration = 0.718 Volume of iodate standard (cm**3) = 10.02 Enter Normalitity of iodate standard = 0.01012766 CLEAN functions: - Reset #RECS, MIN & MAX values in header. - Remove Sea-Bird comments from the header. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Transmissivity, Fluorescence:URU:Seapoint, Oxygen:Dissolved:SBE, Salinity:T0:C0, Bottle_Number, Oxygen:Dissolved, Flag:Oxygen:Dissolved Secondary Channels to Include: Salinity:Bottle Primary file : D:\Data\2002\2002-28\2002-28-0050.cln Secondary file: D:\Data\2002\2002-28\2002-28-0050.sal -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Transmissivity, Fluorescence:URU:Seapoint, Oxygen:Dissolved:SBE, Salinity:T0:C0, Bottle_Number, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Salinity:Bottle, Flag:Salinity:Bottle Secondary Channels to Include: Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Primary file : D:\Data\2002\2002-28\2002-28-0050.add Secondary file: D:\Data\2002\2002-28\2002-28-0050.chl -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Transmissivity, Fluorescence:URU:Seapoint, Oxygen:Dissolved:SBE, Salinity:T0:C0, Bottle_Number, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted Secondary Channels to Include: Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : D:\Data\2002\2002-28\2002-28-0050.tab Secondary file: D:\Data\2002\2002-28\2002-28-0050.nut CLEAN functions: - Reset #RECS, MIN & MAX values in header. - Change Pad Value to -99 in All Channels. - Delete Empty Channels: 0 deleted. - Set channel name post-colon letters to upper case. -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = L:\CRUISE_DATA\2002\2002-16\DOC\2002-16Tempcorr.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Temperature:Primary deg C (IT 10 -0.2700000E-02 0.1000000E+01 -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel $END *COMMENTS Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed frozen using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences utrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -9.9 () (0.93E-01 1) Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.27E-02 1) $END !-1-- --2--- ---3---- --4--- ---5--- ---6--- ---7---- 8- ---9--- - ---11--- - !Samp Pressu Temperat Transm Fluores Oxygen: Salinity Bo Oxygen: F Salinity F !le_ re ure: issivi cence: Dissolv :T0:C0 tt Dissolv l :Bottle l !Numb Primary ty URU: ed:SBE ~u ed ~ ~ !er Seapoin mb e l ! t er d e !---- ------ -------- ------ ------- ------- -------- -- ------- - -------- - *END OF HEADER 635 1.0 17.0128 39.7 2.963 6.340 26.1254 17 6.471 0 -99.0000 0 634 4.9 13.4798 48.5 1.514 5.331 27.2843 16 4.938 0 -99.0000 0 633 9.9 11.3076 53.3 0.845 4.154 28.3600 15 4.092 0 -99.0000 0 632 19.8 9.9521 56.3 0.263 3.642 29.2982 14 3.733 0 -99.0000 0 631 29.8 9.5696 56.1 0.117 3.574 29.6018 13 3.614 0 -99.0000 0 630 49.9 9.0708 54.6 0.085 3.396 29.9655 12 3.413 0 -99.0000 0 629 74.7 8.7803 53.7 0.087 3.254 30.2352 11 3.247 0 -99.0000 0 628 99.8 8.7571 52.8 0.085 2.883 30.4487 10 2.883 0 -99.0000 0 627 124.8 8.7696 53.7 0.086 2.805 30.6614 9 2.812 0 -99.0000 0 626 149.9 8.8118 53.3 0.081 2.760 30.7431 8 2.786 0 -99.0000 0 625 174.9 8.8935 53.8 0.082 2.652 30.8455 7 2.656 0 -99.0000 0 624 199.9 8.9128 53.3 0.086 2.658 30.9155 6 2.666 0 -99.0000 0 623 249.7 8.8982 52.1 0.089 2.713 30.9834 5 2.737 0 -99.0000 0 622 299.8 8.8884 51.3 0.086 2.747 31.0201 4 2.756 0 -99.0000 0 621 399.9 8.9137 50.0 0.091 2.713 31.0633 3 2.704 0 31.0640 0 620 499.8 9.0612 51.8 0.084 2.286 31.1079 2 2.257 0 31.1089 0 619 593.8 9.0964 49.9 0.082 2.176 31.1180 1 2.151 0 31.1192 0