*2013/12/16 15:23:07.61 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2001/05/31 04:22:15.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 14 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII NUMBER OF CHANNELS : 17 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 33 46 2 Pressure decibar 2.6 289.8 3 Temperature:Primary 'deg C (ITS90)' 7.303 8.5871 4 Salinity:T0:C0 PSS-78 23.7384 33.0907 5 Fluorescence:URU:Seapoint mg/m^3 -0.22E-01 3.152 6 Transmissivity %/metre 34.2 57.6 7 PAR uE/m^2/sec 0.5 2.2 8 Bottle_Number n/a 1 14 9 Oxygen:Dissolved mL/L 2.182 6.844 10 Salinity:Bottle PSS-78 33.0307 33.087 11 Oxygen:Dissolved:SBE umol/kg 97 301.1 12 Oxygen:Dissolved umol/kg 97.4 305.5 13 Nitrate_plus_Nitrite umol/L 9.5 29.5 14 Phosphate umol/L 0.83 2.66 15 Silicate umol/L 24.2 62.2 16 Chlorophyll:Extracted mg/m^3 0 4 17 Oxygen:Dissolved:SBE mL/L 2.18 6.82 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 3 I I 0 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 9 F R4 4 11 -99 ' ' 6 F ' ' 1 12 -99 ' ' 6 F ' ' 1 13 -99 ' ' 6 F R4 1 14 -99 ' ' 7 F R4 2 15 -99 ' ' 6 F R4 1 16 -99 ' ' 7 F R4 2 17 -99 ' ' 7 F ' ' 2 $END $REMARKS Data quality is expressed with the following flags ---------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). ---------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2001-08 AGENCY : IOS, Ocean Science and Productivity, Sidney, BC COUNTRY : Canada PROJECT : Line P SCIENTIST : Whitney F. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : NORTH EAST PACIFIC STATION : RI4 EVENT NUMBER : 6 LATITUDE : 51 38.88000 N ! (deg min) LONGITUDE : 127 26.53000 W ! (deg min) WATER DEPTH : 300 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------- -------------- ---------- temperature ' ' primary conductivity ' ' primary pressure ' ' 63507 temperature ' ' secondary conductivity ' ' secondary Seapoint ' ' ' ' transmissometer ' ' 333DR irradiance ' ' 4615 Oxygen ' ' SBE $END $REMARKS SOFTWARE VERSION SEASAVE WIN32 V1.21 Comments from secondary file: D:\data\2001-08\21080006.cln ---------------------------------------------------------- Dissolved oxygen concentration determined using an automated titration system consisting of a Brinkman dosimat (model 665) and a PC 900 Colorimeter. $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 1.8 2001/06/14 22:31:29 1627 1627 DESPIKE 2.1 2001/06/14 22:34:20 1627 1627 DESPIKE 2.1 2001/06/19 12:26:30 1627 1627 BINAVE 4.0.1 2001/06/19 12:27:51 1627 14 MERGE 2.6.1 2001/06/20 09:02:32 14 14 MERGE 2.6.1 2001/06/20 11:01:46 14 14 CHANGE_UNITS 1.0 2001/06/20 22:58:25 14 14 CHANGE_UNITS 1.0 2001/06/20 23:00:41 14 14 MERGE 2.6.1 2001/08/09 12:37:34 14 14 CALIB 10.0 2001/08/27 15:30:53 14 14 REMOVECH 6.0 2001/08/27 16:50:47 14 14 REORDER 1.1 2001/08/28 08:49:16 ? ? HDREDIT2 1.1 2001/10/25 13:53:47 ? ? REMOVECH 6.0 2002/03/18 14:18:08 14 14 CHGUNITS 1.3 2002/03/18 14:19:54 14 14 CHGUNITS 1.3 2002/03/18 14:21:20 14 14 HDREDIT2 1.3 2002/03/18 14:29:28 ? ? CALIB 10.2 2002/03/18 16:06:59 14 14 HDREDIT2 1.51 2003/04/16 19:03:52 ? ? CLEAN 4.2 2003/04/16 19:07:22 14 14 REVERSE 2.0 2004/01/02 10:13:30 14 14 SORT 3.4.1 2004/04/23 11:40:54 14 14 CHANGE_FLAGS 1.0 2013/07/29 14:28:33 14 14 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:23:07 14 14 $END $REMARKS -The following DESPIKE parameters were used: DESPIKE TABLE CHANNEL FIT OVER- MIN MAX MIN MAX SPIKE WIDTH LAP VALUE VALUE STDDEV STDDEV TOL. -------------------- ----- ----- ------- ------- ------- ------- ----- Pressure 55 5 0.00 4500.00 0.10000 999.000 3.00 Temperature:Primary 55 5 1.00 17.00 0.00100 999.000 3.00 Temperature:Secondar 55 5 1.00 17.00 0.00100 999.000 3.00 Salinity:T0:C0 55 5 20.00 35.00 0.00100 999.000 3.00 Salinity:T1:C1 55 5 20.00 35.00 0.00100 999.000 3.00 -The following DESPIKE parameters were used: DESPIKE TABLE CHANNEL FIT OVER- MIN MAX MIN MAX SPIKE WIDTH LAP VALUE VALUE STDDEV STDDEV TOL. -------------------- ----- ----- ------- ------- ------- ------- ----- Chl_fluorescence:Sea 55 5 0.00 15.00 0.01000 999.000 3.00 Transmissivity 55 5 5.00 95.00 0.01000 999.000 3.00 Oxygen:dissolved:mas 55 5 0.00 400.00 0.01000 999.000 3.00 Oxygen:dissolved:vol 55 5 0.00 10.00 0.01000 999.000 3.00 -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.0 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Salinity:T0:C0, Chl_fluorescence:Seapoint, Transmissivity, Irradiance_PAR, Oxygen:dissolved:volume, Bottle_Number Secondary Channels to Include: Dissolved_Oxygen:volume Primary file : D:\data\2001-08\21080006.sam Secondary file: D:\data\2001-08\21080006.cln Comments from secondary file: D:\data\2001-08\21080006.cln ---------------------------------------------------------- C.H. Culbertson's paper on Dissolved Oxygen in the 'Woce Hydrographic Program Operations and Methods - July 1991' CLEAN functions: - Reset #RECS, MIN & MAX values in header. -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Salinity:T0:C0, Chl_fluorescence:Seapoint, Transmissivity, Irradiance_PAR, Oxygen:SBE:volume, Bottle_Number, Dissolved_Oxygen:volume Secondary Channels to Include: Salinity:Bottle Primary file : D:\data\2001-08\21080006.tab Secondary file: D:\data\2001-08\21080006.sal CHANGE units: - Units changed from ml/l to umol/l CHANGE units: - Units changed from ml/l to umol/l -The following MERGE parameters were used: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: Pressure, Temperature:Primary, Salinity:T0:C0, Chl_fluorescence:Seapoint, Transmissivity, Irradiance_PAR, Oxygen:SBE:volume, Bottle_Number, Oxygen:Dissolved:volume, Salinity:Bottle, Oxygen:SBE:mass, Oxygen:Dissolved:mass Secondary Channels to Include: nitrate, phosphate, silicate, chlorophyll Primary file : D:\DATA\2001\2001-08\21080006.hyd Secondary file: D:\DATA\2001\2001-08\21080006.nut -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = 2108_COR.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 4 Salinity:T0:C0 PSS-78 10 -0.2300000E-02 0.1000000E+01 5 Chl_fluorescence:Seapoint ug/l 10 -0.5500000E-01 0.1000000E+01 -No channels were removed. -The following CHANNEL(S) were removed from file. Oxygen:SBE:volume CHANGE units: - Units changed from umol/l to umol/kg CHANGE units: - Units changed from umol/kg to ml/l -The following CALIB parameters were used: Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = M:\Data\oxy\2108\2108oxy.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:SBE:mass umol/kg 10 0.4979300E+01 0.1040000E+01 17 Oxygen:SBE:volume ml/l 10 0.6670000E-01 0.1040000E+01 CLEAN functions: - Reset #RECS, MIN & MAX values in header. - Change Pad Value to -99 in All Channels. - Delete Empty Channels: 0 deleted. - Set channel name post-colon letters to upper case. - Remove Sea-Bird comments from the header. -The following SORT parameters were used. Sorted by channel: Pressure Pressure channel sorted according to values in sort channel $END *COMMENTS Comments from secondary file: D:\data\2001-08\21080006.cln ---------------------------------------------------------- ALL OXYGEN SAMPLES NOT SHAKEN ENOUGH, UNDISOLVED PRECIPITATE IN FLASKS. The SBE Oxygen data should be considered to be within +/- 5%. Collection method: ------------------ A rosette, holding 24 ten-litre water samplers, with a CTD was used. Analysis methods: ----------------- Salinity samples are collected in glass bottles and analyzed on Guildline model 8410 Portasal Salinometers which are standardized with IAPSO standard seawater. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). A Brinkmann model 665 Dosimat and model PC910 Colorimeter is controlled by Visual-Basic program to titrate the oxygen samples. Nutrient samples are analyzed fresh on board using a Technicon AAII auto- analyzer following methods described in Barwell-Clarke and Whitney (1996). Chlorophyll samples are collected in duplicate in calibrated polycarbonate bottles (~330ml), then filtered onto 25mm MFS GF/75 filters at <70mmHg vacuum. The filters are placed in glass scintillation vials and immediately frozen at -20ºC until analysis. The chlorophyll is extracted in 10 ml of 90% acetone for 24h at -20ºC, then brought to room temperature and the extract is decanted and measured using a Turner Designs 10-AU-005-CE fluorometer, which has been calibrated with solutions of commercially prepared chlorophyll. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !--------------------------- --------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -9.9 () (-0.23E-02 1) Chl_fluorescence:Seapoint ug/l 10 -9.9 () (-0.55E-01 1) Oxygen:SBE:mass umol/kg 10 -9.9 () (4.9793 1.04) Oxygen:SBE:volume ml/l 10 -9.9 () (0.667E-01 1.04) $END !-1-- --2--- ---3---- ---4---- ---5--- --6--- --7--- 8- ---9--- ---10--- --11- --12- --13- --14-- --15- --16-- --17-- !Samp Pressu Temperat Salinity Fluores Transm PAR Bo Oxygen: Salinity Oxyge Oxyge Nitra Phosph Silic Chloro Oxygen !le_ re ure: :T0:C0 cence: issivi tt Dissolv :Bottle n: n: te_ ate ate phyll: : !Numb Primary URU: ty ~u ed Disso Disso plus_ Extrac Dissol !er Seapoin mb lved: lved Nitri ted ved: ! t er SBE te SBE !---- ------ -------- -------- ------- ------ ------ -- ------- -------- ----- ----- ----- ------ ----- ------ ------ *END OF HEADER 46 2.6 8.5871 23.7384 3.152 34.2 2.2 14 6.844 -99.0000 301.1 305.5 9.5 0.83 24.2 4.00 6.82 45 10.0 8.2789 30.0961 1.627 45.2 0.6 13 5.756 -99.0000 253.5 257.0 15.7 1.41 24.2 1.30 5.77 44 20.1 8.0749 31.0830 0.268 55.4 0.5 12 5.319 -99.0000 234.8 237.5 18.6 1.66 25.7 0.20 5.34 43 30.4 7.9858 31.5753 0.079 57.3 0.5 11 5.022 -99.0000 221.4 224.2 22.0 1.90 32.6 0.10 5.04 42 50.8 8.1954 32.1214 0.027 57.6 0.5 10 4.325 -99.0000 194.2 193.1 23.7 2.03 39.9 0.00 4.41 41 78.7 7.8510 32.5861 -0.008 57.6 0.5 9 3.466 -99.0000 156.3 154.7 25.3 2.20 47.0 0.00 3.54 40 104.3 7.5947 32.7832 -0.016 56.7 0.5 8 3.170 -99.0000 145.3 141.5 26.1 2.26 50.3 -99.00 3.29 39 129.8 7.4722 32.8985 -0.017 55.5 0.5 7 3.082 -99.0000 139.1 137.6 26.6 2.34 51.2 -99.00 3.15 38 145.3 7.4328 32.9233 -0.006 57.0 0.5 6 3.152 -99.0000 141.7 140.7 26.4 2.31 51.0 -99.00 3.21 37 145.9 7.4340 32.9250 -0.004 56.9 0.5 5 3.030 -99.0000 139.8 135.3 26.8 2.34 52.0 -99.00 3.17 36 171.9 7.3615 33.0001 -0.002 56.2 0.5 4 2.989 -99.0000 136.9 133.4 27.0 2.35 52.9 -99.00 3.09 35 199.8 7.3371 33.0343 -0.022 56.1 0.5 3 2.784 33.0307 127.7 124.3 27.8 2.41 55.5 -99.00 2.89 34 249.4 7.3030 33.0543 -0.002 53.8 0.5 2 2.736 33.0579 129.1 122.1 27.8 2.44 57.2 -99.00 2.92 33 289.8 7.3302 33.0907 -0.019 53.0 0.5 1 2.182 33.0870 97.0 97.4 29.5 2.66 62.2 -99.00 2.18